RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ZBTB10Q96DT7 871 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 OSBPL7Q9BZF2 842 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 PRMT7Q9NVM4 692 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 GOLGA6L7A0A1B0GV03 622 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 TMEM120BA0PK00 339 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 LRRD1A4D1F6 860 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 ABHD2P08910 425 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 IQCF3P0C7M6 154 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 RAD23BP54727 409 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 OASLQ15646 514 aaKnown RBP18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 MOB2Q70IA6 237 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 C1orf127Q8N9H9 656 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 NKD2Q969F2 451 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 C9orf72Q96LT7 481 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 RBM15Q96T37 977 aaKnown RBP eCLIP18.96■□□□□ 0.632e-7■□□□□ 9.9
PDLIM7-207ENST00000486828 CCDC77Q9BR77 488 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 PDGFCQ9NRA1 345 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 ERAP1Q9NZ08 941 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 CYTH4Q9UIA0 394 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 MGAMO43451 1857 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 GPR25O00155 361 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 NFICP08651 508 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 KRT3P12035 628 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 PSMA2P25787 234 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 RFC1P35251 1148 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 MAGEA4P43358 317 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 PHKA2P46019 1235 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 ARSEP51690 589 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 GSCP56915 257 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 POU5F1BQ06416 359 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 FAM187BQ17R55 369 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 WDR72Q3MJ13 1102 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 WDR78Q5VTH9 848 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 FASTKD5Q7L8L6 764 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 FNIP1Q8TF40 1166 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 ACSF2Q96CM8 615 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 NSRP1Q9H0G5 558 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 SDCBP2Q9H190 292 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 RNPEPQ9H4A4 650 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 IFT122Q9HBG6 1241 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 MCM3APO60318 1980 aa18.95■□□□□ 0.62
PDLIM7-207ENST00000486828 C3orf70A6NLC5 250 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 H0YHG0 523 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 GOLGA8SH3BPF8 625 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 CDH16O75309 829 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ITGAVP06756 1048 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ZSCAN5DPP0CG00 497 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 IFNAR2P48551 515 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 SLC25A11Q02978 314 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 TNFAIP2Q03169 654 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 LACTB2Q53H82 288 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ANKRD20A8PQ5CZ79 823 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ZNF484Q5JVG2 852 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 WDR35Q9P2L0 1181 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 TPX2Q9ULW0 747 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 EFR3BQ9Y2G0 817 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ASB14A6NK59 587 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 LACTBL1A8MY62 500 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 NDC80O14777 642 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 VIMP08670 466 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 STAG3L1P0CL83 205 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 MCF2P10911 925 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 CETPP11597 493 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 CREB1P16220 341 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 CDH8P55286 799 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 PSMC1P62191 440 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 GPS1Q13098 491 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 TTLL12Q14166 644 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ITIH4Q14624 930 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 FBXW10Q5XX13 1052 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 CCDC13Q8IYE1 715 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ANKS4BQ8N8V4 417 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 JOSD2Q8TAC2 188 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 CCT6BQ92526 530 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 OPTNQ96CV9 577 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 SAMD15Q9P1V8 674 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 TJP2Q9UDY2 1190 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 NAALADL1Q9UQQ1 740 aa18.94■□□□□ 0.62
PDLIM7-207ENST00000486828 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 LRCH4O75427 683 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 KRT7P08729 469 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 ETS1P14921 441 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 MORF4L2Q15014 288 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 JADE1Q6IE81 842 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 IFNLR1Q8IU57 520 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 CYP4X1Q8N118 509 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 RIBC1Q8N443 379 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 ARFGAP1Q8N6T3 406 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 SLC4A11Q8NBS3 891 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 SHCBP1Q8NEM2 672 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 CXorf38Q8TB03 319 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 SLC35B2Q8TB61 432 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 DYDC1Q8WWB3 177 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 HAUS1Q96CS2 278 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 CFAP57Q96MR6 1250 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 TTC25Q96NG3 672 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 KDM4CQ9H3R0 1056 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 PCDH9Q9HC56 1237 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 SAYSD1Q9NPB0 183 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 EURLQ9NYK6 297 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms