RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 PTPN5P54829 565 aa19.61■□□□□ 0.73
CLDN11-206ENST00000486429 PNOCQ13519 176 aa19.61■□□□□ 0.73
CLDN11-206ENST00000486429 SNW1Q13573 536 aaKnown RBP19.61■□□□□ 0.73
CLDN11-206ENST00000486429 TDRD10Q5VZ19 366 aaKnown RBP19.61■□□□□ 0.73
CLDN11-206ENST00000486429 SPATA2LQ8IUW3 424 aaPredicted RBP19.61■□□□□ 0.73
CLDN11-206ENST00000486429 GIPC2Q8TF65 315 aa19.61■□□□□ 0.73
CLDN11-206ENST00000486429 ZSWIM3Q96MP5 696 aa19.61■□□□□ 0.73
CLDN11-206ENST00000486429 ATXN3LQ9H3M9 355 aa19.61■□□□□ 0.73
CLDN11-206ENST00000486429 GTF3C4Q9UKN8 822 aa19.61■□□□□ 0.73
CLDN11-206ENST00000486429 CDH9Q9ULB4 789 aa19.61■□□□□ 0.73
CLDN11-206ENST00000486429 CIZ1Q9ULV3 898 aaPredicted RBP19.61■□□□□ 0.73
CLDN11-206ENST00000486429 CDC25CP30307 473 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 MYL6P60660 151 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 PSMC1P62191 440 aaKnown RBP19.6■□□□□ 0.73
CLDN11-206ENST00000486429 RPL10AP62906 217 aaKnown RBP19.6■□□□□ 0.73
CLDN11-206ENST00000486429 CLDN10P78369 228 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 NFIL3Q16649 462 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 CCDC142Q17RM4 750 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 ZNF699Q32M78 642 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 WDR72Q3MJ13 1102 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 ARHGAP15Q53QZ3 475 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 C4orf50Q6ZRC1 276 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 GAREM2Q75VX8 874 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 ENGASEQ8NFI3 743 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 TMC2Q8TDI7 906 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 FUBP3Q96I24 572 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLDN11-206ENST00000486429 PLA2G2FQ9BZM2 168 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 SNX25Q9H3E2 840 aa19.6■□□□□ 0.73
CLDN11-206ENST00000486429 TACC1O75410 805 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 RPL13P26373 211 aaKnown RBP19.59■□□□□ 0.73
CLDN11-206ENST00000486429 GPR15P49685 360 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 NHLH1Q02575 133 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 NCOA4Q13772 614 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 GRM2Q14416 872 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 MAPRE1Q15691 268 aaKnown RBP19.59■□□□□ 0.73
CLDN11-206ENST00000486429 MLF2Q15773 248 aaPredicted RBP19.59■□□□□ 0.73
CLDN11-206ENST00000486429 CFAP221Q4G0U5 840 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 STXBP5Q5T5C0 1151 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 PHLDB3Q6NSJ2 640 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 SMYD4Q8IYR2 804 aaPredicted RBP19.59■□□□□ 0.73
CLDN11-206ENST00000486429 DEPDC1BQ8WUY9 529 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 MYLPFQ96A32 169 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 SHDQ96IW2 340 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 MRPL45Q9BRJ2 306 aaKnown RBP19.59■□□□□ 0.73
CLDN11-206ENST00000486429 XYLT2Q9H1B5 865 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 TRPV4Q9HBA0 871 aa19.59■□□□□ 0.73
CLDN11-206ENST00000486429 NXF1Q9UBU9 619 aaKnown RBP19.59■□□□□ 0.73
CLDN11-206ENST00000486429 HOOK1Q9UJC3 728 aaKnown RBP19.59■□□□□ 0.73
CLDN11-206ENST00000486429 MYBPHLA2RUH7 354 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 MAPK13O15264 365 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 GALR2O43603 387 aaPredicted RBP19.58■□□□□ 0.72
CLDN11-206ENST00000486429 SMC2O95347 1197 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 CSH1P0DML2 217 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 CSH2P0DML3 217 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 CYP2F1P24903 491 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 LMO2P25791 158 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 VIPR2P41587 438 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 DLG4P78352 724 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 CYP4F8P98187 520 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 PRKCQQ04759 706 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 TCF15Q12870 199 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 DDR2Q16832 855 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 ZACNQ401N2 412 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 ZCWPW2Q504Y3 356 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 ZNF667Q5HYK9 610 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 GPR158Q5T848 1215 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 FAM171BQ6P995 826 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 VITQ6UXI7 678 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 OR6B3Q8NGW1 331 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 DNASE1L2Q92874 299 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 E2F7Q96AV8 911 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 TIGD1Q96MW7 591 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 BRD9Q9H8M2 597 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 VRTNQ9H8Y1 702 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 IL21Q9HBE4 155 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 CRTAC1Q9NQ79 661 aa19.58■□□□□ 0.72
CLDN11-206ENST00000486429 NUP210Q8TEM1 1887 aaPredicted RBP19.58■□□□□ 0.72
CLDN11-206ENST00000486429 ATP2C2O75185 946 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 C4BPAP04003 597 aaKnown RBP19.57■□□□□ 0.72
CLDN11-206ENST00000486429 PDGFRBP09619 1106 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 FAM163BP0C2L3 166 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 MAGEA11P43364 429 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 SDHAF4Q5VUM1 108 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 INTS8Q75QN2 995 aaKnown RBP19.57■□□□□ 0.72
CLDN11-206ENST00000486429 SCN4BQ8IWT1 228 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 FAM186BQ8IYM0 893 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 STKLD1Q8NE28 680 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 SMARCE1Q969G3 411 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 GSDMAQ96QA5 445 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 MKNK1Q9BUB5 465 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 TRMT61BQ9BVS5 477 aaKnown RBP19.57■□□□□ 0.72
CLDN11-206ENST00000486429 SMYD3Q9H7B4 428 aa19.57■□□□□ 0.72
CLDN11-206ENST00000486429 MAGED2Q9UNF1 606 aaPredicted RBP19.57■□□□□ 0.72
CLDN11-206ENST00000486429 WDFY4Q6ZS81 3184 aa19.56■□□□□ 0.72
CLDN11-206ENST00000486429 IKBKBO14920 756 aa19.56■□□□□ 0.72
CLDN11-206ENST00000486429 PI15O43692 258 aa19.56■□□□□ 0.72
CLDN11-206ENST00000486429 KINO60870 393 aaKnown RBP19.56■□□□□ 0.72
CLDN11-206ENST00000486429 AKAP3O75969 853 aa19.56■□□□□ 0.72
CLDN11-206ENST00000486429 VNN1O95497 513 aa19.56■□□□□ 0.72
CLDN11-206ENST00000486429 KRT13P13646 458 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms