RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 DCAF17Q5H9S7 520 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 EMC4Q5J8M3 183 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 FSTL4Q6MZW2 842 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 TIGD7Q6NT04 549 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 LPCAT2Q7L5N7 544 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 TMEM110Q86TL2 294 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 OR8H3Q8N146 312 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 TMEM52Q8NDY8 209 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 PIP4K2CQ8TBX8 421 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 HDAC7Q8WUI4 952 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 NRBF2Q96F24 287 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 FCRL2Q96LA5 508 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 CEP295NLQ96MC4 621 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 RIPOR3Q96MK2 946 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 RUNDC3BQ96NL0 473 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 PPP1R9BQ96SB3 815 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 YME1L1Q96TA2 773 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 LRFN3Q9BTN0 628 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 CAPS2Q9BXY5 557 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 C2orf40Q9H1Z8 148 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 MROH8Q9H579 483 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 C19orf44Q9H6X5 657 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 KCNK12Q9HB15 430 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 WASH6PQ9NQA3 447 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 HAUS2Q9NVX0 235 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 ERVK13-1Q9NX77 482 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 MCM9Q9NXL9 1143 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 RTEL1Q9NZ71 1219 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 HOOK1Q9UJC3 728 aaKnown RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 CDC23Q9UJX2 597 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 KCTD3Q9Y597 815 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 RNF123Q5XPI4 1314 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 RRBP1Q9P2E9 1410 aaKnown RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 SETD1BQ9UPS6 1966 aaKnown RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 A0A087X0M5 115 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 A0A1B0GX30 115 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TMEM82A0PJX8 343 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 LCHNA4D1U4 455 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 C22orf46C9J442 243 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 H0Y626 953 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 KIF2AO00139 706 aaPredicted RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 AP3B1O00203 1094 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ABLIM1O14639 778 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 SLC16A6O15403 523 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 IRAK2O43187 625 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 FOXD2O60548 495 aaPredicted RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 NMT2O60551 498 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 NOL3O60936 208 aaKnown RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 ADCY5O95622 1261 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ALDH2P05091 517 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TPM1P09493 284 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 MYBP10242 640 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 MYF5P13349 255 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 SCG2P13521 617 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ATP1A3P13637 1013 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 OSMP13725 252 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 GAP43P17677 238 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TRIM21P19474 475 aaKnown RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 CNTFP26441 200 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TRHRP34981 398 aaPredicted RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 ACTN2P35609 894 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TKTL1P51854 596 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 CASP5P51878 434 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 BCAR1P56945 870 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 C21orf58P58505 322 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 DCAF7P61962 342 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PPARDQ03181 441 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TRAF1Q13077 416 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 SP140Q13342 867 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 KRT32Q14532 448 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PLS1Q14651 629 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 KCNB1Q14721 858 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PITRM1Q5JRX3 1037 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 CATSPEREQ5SY80 951 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 THEMIS2Q5TEJ8 643 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 IZUMO3Q5VZ72 239 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 CPZQ66K79 652 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PGBD2Q6P3X8 592 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PACS1Q6VY07 963 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 KCTD1Q719H9 257 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 MAEAQ7L5Y9 396 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TRIM48Q8IWZ4 208 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 SIRT2Q8IXJ6 389 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 SPERTQ8NA61 448 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 MARCH10Q8NA82 808 aaPredicted RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 USP38Q8NB14 1042 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 IPMKQ8NFU5 416 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PHOSPHO1Q8TCT1 267 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 CCHCR1Q8TD31 782 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PLEKHO2Q8TD55 490 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 BRI3BPQ8WY22 251 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 SHC3Q92529 594 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ARL8AQ96BM9 186 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 TTPALQ9BTX7 342 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 HERC2P3Q9BVR0 1158 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ACAT2Q9BWD1 397 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ANO3Q9BYT9 981 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms