RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TAF12Q16514 161 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 USP39Q53GS9 565 aaKnown RBP11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 ANO7Q6IWH7 933 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 RINT1Q6NUQ1 792 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 CC2D1AQ6P1N0 951 aaPredicted RBP11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 ZPBP2Q6X784 338 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 C1orf186Q6ZWK4 172 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 TTC16Q8NEE8 873 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 PIGKQ92643 395 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 CD101Q93033 1021 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 ACDQ96AP0 544 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 NTPCRQ9BSD7 190 aaKnown RBP11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 ECT2Q9H8V3 914 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 MSRB2Q9Y3D2 182 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 WNT6Q9Y6F9 365 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 ADAMTS20P59510 1910 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 FAM189A1O60320 539 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 CAPNS1P04632 268 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 HAPLN1P10915 354 aaPredicted RBP11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 HNRNPLP14866 589 aaKnown RBP eCLIP11.77□□□□□ -0.531e-8■□□□□ 10.7
SMARCC1-205ENST00000483847 GPR15P49685 360 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 SIM1P81133 766 aaPredicted RBP11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 MTF1Q14872 753 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 C2orf27AQ580R0 203 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 TRIM61Q5EBN2 209 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 TTC38Q5R3I4 469 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 SPATA1Q5VX52 437 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 C9orf57Q5W0N0 161 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 C19orf48Q6RUI8 117 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 ARMCX6Q7L4S7 300 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 MON1AQ86VX9 555 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 RASSF3Q86WH2 238 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 CPA6Q8N4T0 437 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 FRMD1Q8N878 549 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 MDGA1Q8NFP4 955 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 SPIRE2Q8WWL2 714 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 C17orf75Q9HAS0 396 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 TMEM74BQ9NUR3 256 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 ABI2Q9NYB9 513 aaPredicted RBP11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 ZMYM5Q9UJ78 669 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 DNM3Q9UQ16 869 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 SCN1AP35498 2009 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 PCNX2A6NKB5 2137 aa11.77□□□□□ -0.53
SMARCC1-205ENST00000483847 FLNBO75369 2602 aaKnown RBP11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 MYH11P35749 1972 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 PIRO00625 290 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 TADA3O75528 432 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 CYP11A1P05108 521 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 NFICP08651 508 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 PLS3P13797 630 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 CDC25AP30304 524 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 PTGER3P43115 390 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 SEC13P55735 322 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 FAM193AP78312 1265 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 ST3GAL1Q11201 340 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 ORC2Q13416 577 aaPredicted RBP11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 SOWAHCQ53LP3 525 aaPredicted RBP11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 SDHAF4Q5VUM1 108 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 JADE1Q6IE81 842 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 PIP4P1Q86T03 277 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 C11orf74Q86VG3 221 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 TTC30AQ86WT1 665 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 CCDC33Q8N5R6 958 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 IGSF22Q8N9C0 903 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 USP33Q8TEY7 942 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 RLN3Q8WXF3 142 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 CNOT6LQ96LI5 555 aaKnown RBP11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 CYP2S1Q96SQ9 504 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 FSCN3Q9NQT6 498 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 TMLHEQ9NVH6 421 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 DUS2Q9NX74 493 aaKnown RBP11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 EVLQ9UI08 416 aaPredicted RBP11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 ADAMTS9Q9P2N4 1935 aa11.76□□□□□ -0.53
SMARCC1-205ENST00000483847 HELZ2Q9BYK8 2649 aaKnown RBP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 ANO9A1A5B4 782 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 K7EQS6 105 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 XPOTO43592 962 aaKnown RBP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 ADRB2P07550 413 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 ENGP17813 658 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 GUCY2CP25092 1073 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 DDX6P26196 483 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 SEMA3BQ13214 749 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 PDIA5Q14554 519 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 ZNF268Q14587 947 aaPredicted RBP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 ZNF77Q15935 545 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 IL17AQ16552 155 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 EML3Q32P44 896 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 WSCD1Q658N2 575 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 TMEM92Q6UXU6 159 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 PROSER1Q86XN7 944 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 SFTPA1Q8IWL2 248 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 TMEFF1Q8IYR6 380 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 CHCHD4Q8N4Q1 142 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 OLIG1Q8TAK6 271 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 SPPL2BQ8TCT7 592 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms