RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TMC6Q7Z403 805 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 LIMS2Q7Z4I7 341 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 LRRTM3Q86VH5 581 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 RBBP8NLQ8NC74 664 aaPredicted RBP14.1□□□□□ -0.15
HDAC1-208ENST00000482310 B3GALNT2Q8NCR0 500 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 WHAMMQ8TF30 809 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 MYLPFQ96A32 169 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 SPAG5Q96R06 1193 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 MED10Q9BTT4 135 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 NT5C1AQ9BXI3 368 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 NSUN3Q9H649 340 aaKnown RBP14.1□□□□□ -0.15
HDAC1-208ENST00000482310 ACP6Q9NPH0 428 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 PLCB1Q9NQ66 1216 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 CRTAC1Q9NQ79 661 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 MTCH2Q9Y6C9 303 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 RNF225M0QZC1 329 aaPredicted RBP14.09□□□□□ -0.15
HDAC1-208ENST00000482310 CLDN5O00501 218 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 TBC1D4O60343 1298 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 GFPT2O94808 682 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 EPCAMP16422 314 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 PTPN1P18031 435 aaKnown RBP14.09□□□□□ -0.15
HDAC1-208ENST00000482310 ACO1P21399 889 aaKnown RBP14.09□□□□□ -0.15
HDAC1-208ENST00000482310 ADORA2BP29275 332 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 PBX1P40424 430 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 RAD23BP54727 409 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 ARID5AQ03989 594 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 GOLGA8FQ08AF8 430 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 GOLGA8DPQ0D2H9 430 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 INCA1Q0VD86 236 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 UBR7Q8N806 425 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 C12orf29Q8N999 325 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 SLC4A11Q8NBS3 891 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 HEXIM2Q96MH2 286 aaKnown RBP14.09□□□□□ -0.15
HDAC1-208ENST00000482310 ACBD6Q9BR61 282 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 ZCWPW1Q9H0M4 648 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 RXFP1Q9HBX9 757 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 FNIP2Q9P278 1114 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 CDH9Q9ULB4 789 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 BACE2Q9Y5Z0 518 aa14.09□□□□□ -0.15
HDAC1-208ENST00000482310 MUC3AQ02505 3323 aa14.08□□□□□ -0.15
HDAC1-208ENST00000482310 OBSL1O75147 1896 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 A0A1W2PQC6 194 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 FOXN3O00409 490 aaPredicted RBP14.08□□□□□ -0.16
HDAC1-208ENST00000482310 LINC01565O15544 149 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 CYP26A1O43174 497 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 TGM5O43548 720 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 SOAT2O75908 522 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 ADCY5O95622 1261 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 GLUD1P00367 558 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 BRD2P25440 801 aaKnown RBP14.08□□□□□ -0.16
HDAC1-208ENST00000482310 ADCY1Q08828 1119 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 HYAL1Q12794 435 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 ENOSF1Q7L5Y1 443 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 SPATA2LQ8IUW3 424 aaPredicted RBP14.08□□□□□ -0.16
HDAC1-208ENST00000482310 DRC7Q8IY82 874 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 DCP1BQ8IZD4 617 aaKnown RBP14.08□□□□□ -0.16
HDAC1-208ENST00000482310 ATAD1Q8NBU5 361 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 STKLD1Q8NE28 680 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 JAKMIP2Q96AA8 810 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 TMEM176AQ96HP8 235 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 TNIP3Q96KP6 325 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 SEPT5Q99719 369 aaPredicted RBP14.08□□□□□ -0.16
HDAC1-208ENST00000482310 APOL5Q9BWW9 433 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 NAA15Q9BXJ9 866 aaKnown RBP14.08□□□□□ -0.16
HDAC1-208ENST00000482310 GPR88Q9GZN0 384 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 PRDM6Q9NQX0 595 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 CEP72Q9P209 647 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 SLC27A5Q9Y2P5 690 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 IRAK3Q9Y616 596 aa14.08□□□□□ -0.16
HDAC1-208ENST00000482310 TTC28Q96AY4 2481 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 MTMR11A4FU01 709 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 F8VZ95 297 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 PRRG1O14668 218 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 RFX1P22670 979 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 CLCN4P51793 760 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 SKIV2LQ15477 1246 aaKnown RBP14.07□□□□□ -0.16
HDAC1-208ENST00000482310 DUSP6Q16828 381 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 MGAT5BQ3V5L5 792 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 SLC8B1Q6J4K2 584 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 UNC93AQ86WB7 457 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 VSTM4Q8IW00 320 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 SPATA18Q8TC71 538 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 SLC2A14Q8TDB8 520 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 SHC3Q92529 594 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 PCED1BQ96HM7 432 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 FAXDC2Q96IV6 333 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 FAM81BQ96LP2 452 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 ZNF518BQ9C0D4 1074 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 CYP4F11Q9HBI6 524 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 MAN1C1Q9NR34 630 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 HCFC2Q9Y5Z7 792 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 DENND4CQ5VZ89 1909 aa14.07□□□□□ -0.16
HDAC1-208ENST00000482310 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
HDAC1-208ENST00000482310 THAP12O43422 761 aa14.06□□□□□ -0.16
HDAC1-208ENST00000482310 SEC24AO95486 1093 aa14.06□□□□□ -0.16
HDAC1-208ENST00000482310 VNN2O95498 520 aa14.06□□□□□ -0.16
HDAC1-208ENST00000482310 GYPCP04921 128 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms