RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ZNF334Q9HCZ1 680 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 GTF3C4Q9UKN8 822 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 CDH9Q9ULB4 789 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 CA14Q9ULX7 337 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 DOCK8Q8NF50 2099 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 TCHHQ07283 1943 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 KRBA1A5PL33 1030 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-213ENST00000482192 IKBKBO14920 756 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 HCRTO43612 131 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 TACC1O75410 805 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 CLSTN1O94985 981 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 FAM163BP0C2L3 166 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 NPR3P17342 541 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 AOC1P19801 751 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 RFX1P22670 979 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 GABRR2P28476 465 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 CDC25CP30307 473 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 RPL10AP62906 217 aaKnown RBP12.72□□□□□ -0.37
HMGN1-213ENST00000482192 DLG4P78352 724 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 NCOA4Q13772 614 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 ARHGAP15Q53QZ3 475 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 IER5LQ5T953 404 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 TDRD10Q5VZ19 366 aaKnown RBP12.72□□□□□ -0.37
HMGN1-213ENST00000482192 TANGO2Q6ICL3 276 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
HMGN1-213ENST00000482192 GIPC2Q8TF65 315 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 SHDQ96IW2 340 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 SYT15Q9BQS2 421 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 GTPBP4Q9BZE4 634 aaKnown RBP12.72□□□□□ -0.37
HMGN1-213ENST00000482192 SNX25Q9H3E2 840 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 ATXN3LQ9H3M9 355 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 VRTNQ9H8Y1 702 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 TRPV4Q9HBA0 871 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
HMGN1-213ENST00000482192 KMT2EQ8IZD2 1858 aa12.72□□□□□ -0.37
HMGN1-213ENST00000482192 MYBPHLA2RUH7 354 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 STK25O00506 426 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 KINO60870 393 aaKnown RBP12.71□□□□□ -0.37
HMGN1-213ENST00000482192 AKAP3O75969 853 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 C4BPAP04003 597 aaKnown RBP12.71□□□□□ -0.37
HMGN1-213ENST00000482192 CYP2F1P24903 491 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 LMO2P25791 158 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 GNL1P36915 607 aaPredicted RBP12.71□□□□□ -0.37
HMGN1-213ENST00000482192 VAMP7P51809 220 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 PTPN5P54829 565 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 PSMC1P62191 440 aaKnown RBP12.71□□□□□ -0.37
HMGN1-213ENST00000482192 ENPEPQ07075 957 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 EDRF1Q3B7T1 1238 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 ZACNQ401N2 412 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 ZCWPW2Q504Y3 356 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 ZNF658Q5TYW1 1059 aaPredicted RBP12.71□□□□□ -0.37
HMGN1-213ENST00000482192 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 GAREM2Q75VX8 874 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 SMYD4Q8IYR2 804 aaPredicted RBP12.71□□□□□ -0.37
HMGN1-213ENST00000482192 PRSS33Q8NF86 280 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 SPATA20Q8TB22 786 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 SMARCE1Q969G3 411 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 MYLPFQ96A32 169 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 E2F7Q96AV8 911 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 MRPL45Q9BRJ2 306 aaKnown RBP12.71□□□□□ -0.37
HMGN1-213ENST00000482192 PLA2G2FQ9BZM2 168 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 TBC1D17Q9HA65 648 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 CRTAC1Q9NQ79 661 aa12.71□□□□□ -0.37
HMGN1-213ENST00000482192 ATP2C2O75185 946 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 CSH1P0DML2 217 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 CSH2P0DML3 217 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 KRT13P13646 458 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 P4HA1P13674 534 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 HMGA1P17096 107 aaKnown RBP12.7□□□□□ -0.38
HMGN1-213ENST00000482192 PSMC3P17980 439 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 PSMC2P35998 433 aaKnown RBP12.7□□□□□ -0.38
HMGN1-213ENST00000482192 MAGEA11P43364 429 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 GPR15P49685 360 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 CYP27A1Q02318 531 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 ADAM9Q13443 819 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 GRM2Q14416 872 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 DDR2Q16832 855 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 SGSM1Q2NKQ1 1148 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 COBLL1Q53SF7 1204 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 ZNF667Q5HYK9 610 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 STXBP5Q5T5C0 1151 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 GPR158Q5T848 1215 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 VSTM1Q6UX27 236 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 VITQ6UXI7 678 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-213ENST00000482192 FAM186BQ8IYM0 893 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 DEPDC1BQ8WUY9 529 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 TAF4BQ92750 862 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 DNASE1L2Q92874 299 aa12.7□□□□□ -0.38
HMGN1-213ENST00000482192 TRMT61BQ9BVS5 477 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms