RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 FAM78AQ5JUQ0 283 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 INTS8Q75QN2 995 aaKnown RBP13.96□□□□□ -0.17
HDAC1-207ENST00000481281 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC1-207ENST00000481281 ASB16Q96NS5 453 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 MMS19Q96T76 1030 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 KXD1Q9BQD3 176 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 LPIN3Q9BQK8 851 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 SYT15Q9BQS2 421 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 MRPL45Q9BRJ2 306 aaKnown RBP13.96□□□□□ -0.17
HDAC1-207ENST00000481281 GTPBP4Q9BZE4 634 aaKnown RBP13.96□□□□□ -0.17
HDAC1-207ENST00000481281 CRTAC1Q9NQ79 661 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 GTF3C4Q9UKN8 822 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 CDH9Q9ULB4 789 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 NME7Q9Y5B8 376 aa13.96□□□□□ -0.17
HDAC1-207ENST00000481281 MUC6Q6W4X9 2439 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 A0A1W2PRU2 124 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 MYBPHLA2RUH7 354 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 ATP2C2O75185 946 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 FGF19O95750 216 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 CFHP08603 1231 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 PSMC2P35998 433 aaKnown RBP13.95□□□□□ -0.18
HDAC1-207ENST00000481281 ANP32AP39687 249 aaKnown RBP13.95□□□□□ -0.18
HDAC1-207ENST00000481281 VAMP7P51809 220 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 VCPP55072 806 aaKnown RBP13.95□□□□□ -0.18
HDAC1-207ENST00000481281 PSMC1P62191 440 aaKnown RBP13.95□□□□□ -0.18
HDAC1-207ENST00000481281 ADAM9Q13443 819 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 TEAD2Q15562 447 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 ZNF699Q32M78 642 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 CWF19L1Q69YN2 538 aaKnown RBP13.95□□□□□ -0.18
HDAC1-207ENST00000481281 GAREM2Q75VX8 874 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 SV2AQ7L0J3 742 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 FAM186BQ8IYM0 893 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 GPR152Q8TDT2 470 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 SMARCD2Q92925 531 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 ELSPBP1Q96BH3 223 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 ZSWIM3Q96MP5 696 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 PI4K2AQ9BTU6 479 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 MKNK1Q9BUB5 465 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 GPR88Q9GZN0 384 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 KCNH6Q9H252 994 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 TRPV4Q9HBA0 871 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 FBXL21Q9UKT6 434 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 GREB1Q4ZG55 1949 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 COL4A2P08572 1712 aa13.95□□□□□ -0.18
HDAC1-207ENST00000481281 KRBA1A5PL33 1030 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 HMGA1P17096 107 aaKnown RBP13.94□□□□□ -0.18
HDAC1-207ENST00000481281 NPR3P17342 541 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 CYP2F1P24903 491 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 GABRR2P28476 465 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 MAGEA11P43364 429 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 GPR15P49685 360 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 RPL10AP62906 217 aaKnown RBP13.94□□□□□ -0.18
HDAC1-207ENST00000481281 GPC5P78333 572 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
HDAC1-207ENST00000481281 ZNF667Q5HYK9 610 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 TANGO2Q6ICL3 276 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 SPATA2LQ8IUW3 424 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-207ENST00000481281 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
HDAC1-207ENST00000481281 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 SIX5Q8N196 739 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 FAM200AQ8TCP9 573 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 TAF4BQ92750 862 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 PLA2G2FQ9BZM2 168 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 ZFP14Q9HCL3 533 aa13.94□□□□□ -0.18
HDAC1-207ENST00000481281 NXF1Q9UBU9 619 aaKnown RBP13.94□□□□□ -0.18
HDAC1-207ENST00000481281 ASS1P00966 412 aaKnown RBP13.93□□□□□ -0.18
HDAC1-207ENST00000481281 PDGFRBP09619 1106 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 TRIM49P0CI25 452 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 TRIM49CP0CI26 452 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 KRT13P13646 458 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 CDC25CP30307 473 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 AVPR2P30518 371 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 GNL1P36915 607 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-207ENST00000481281 CLCN5P51795 746 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 PMS1P54277 932 aaKnown RBP13.93□□□□□ -0.18
HDAC1-207ENST00000481281 LRRC63Q05C16 580 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 SGSM1Q2NKQ1 1148 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 STXBP5Q5T5C0 1151 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 TMEM105Q8N8V8 129 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-207ENST00000481281 MYCBPAPQ8TBZ2 947 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 GIPC2Q8TF65 315 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 PCED1BQ96HM7 432 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 SNX25Q9H3E2 840 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 MFSD1Q9H3U5 465 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 SMYD3Q9H7B4 428 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 ARHGEF3Q9NR81 526 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 MAN1B1Q9UKM7 699 aa13.93□□□□□ -0.18
HDAC1-207ENST00000481281 KIF26AQ9ULI4 1882 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-207ENST00000481281 NCANO14594 1321 aa13.92□□□□□ -0.18
HDAC1-207ENST00000481281 COL4A3Q01955 1670 aa13.92□□□□□ -0.18
HDAC1-207ENST00000481281 CETN3O15182 167 aa13.92□□□□□ -0.18
HDAC1-207ENST00000481281 NOL4O94818 638 aa13.92□□□□□ -0.18
HDAC1-207ENST00000481281 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
HDAC1-207ENST00000481281 CSH1P0DML2 217 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms