RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 KRT12Q99456 494 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 NAP1L3Q99457 506 aaPredicted RBP15.26■□□□□ 0.03
CLDN18-203ENST00000479660 RSAD1Q9HA92 442 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 TJP2Q9UDY2 1190 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 IP6K2Q9UHH9 426 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 L1RE1Q9UN81 338 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 PTPN22Q9Y2R2 807 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 TMEM191CA6NGB0 347 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 DNM1LO00429 736 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 PDGFRBP09619 1106 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 FGFR1P11362 822 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 SKIP12755 728 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 RWDD2BP57060 319 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 PSMC1P62191 440 aaKnown RBP15.26■□□□□ 0.03
CLDN18-203ENST00000479660 MRPS25P82663 173 aaKnown RBP15.26■□□□□ 0.03
CLDN18-203ENST00000479660 TAP1Q03518 808 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 PDCLQ13371 301 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 GLE1Q53GS7 698 aaKnown RBP15.26■□□□□ 0.03
CLDN18-203ENST00000479660 TRAF7Q6Q0C0 670 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 PGBD4Q96DM1 585 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 SNX25Q9H3E2 840 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 DPEP3Q9H4B8 488 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 CACNG4Q9UBN1 327 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 FRMPD3Q5JV73 1810 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 PYGMP11217 842 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 MCM3P25205 808 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 LMO2P25791 158 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 CLCNKBP51801 687 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 MBTPS1Q14703 1052 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 MTFR1Q15390 333 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 CLUL1Q15846 466 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 GOLGA7BQ2TAP0 167 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 PPP1R15BQ5SWA1 713 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 SEL1L2Q5TEA6 688 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 DAB2IPQ5VWQ8 1189 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 AADACL2Q6P093 401 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 LIMS2Q7Z4I7 341 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 KLHL7Q8IXQ5 586 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 ADGRF2Q8IZF7 708 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 TOP6BLQ8N6T0 577 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 HDAC7Q8WUI4 952 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 DEFB118Q96PH6 123 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 ST7Q9NRC1 585 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 FAM49BQ9NUQ9 324 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 WDR35Q9P2L0 1181 aa15.25■□□□□ 0.03
CLDN18-203ENST00000479660 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.25■□□□□ 0.03
CLDN18-203ENST00000479660 GOLGA8SH3BPF8 625 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 CCDC188H7C350 402 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 CYB561D2O14569 222 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 HCRTO43612 131 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ZMYND10O75800 440 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ERBB2P04626 1255 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 KRT3P12035 628 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 IGFBP6P24592 240 aaPredicted RBP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 SLC7A5Q01650 507 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 XYLT1Q86Y38 959 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 CRYBG2Q8N1P7 616 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 HINFPQ9BQA5 517 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 DNAI2Q9GZS0 605 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ARFGAP3Q9NP61 516 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 UBN1Q9NPG3 1134 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 PAK6Q9NQU5 681 aaPredicted RBP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 DMGDHQ9UI17 866 aaKnown RBP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 USTQ9Y2C2 406 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 CASTOR2A6NHX0 329 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 SIGLEC16A6NMB1 481 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 PODXLO00592 558 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ERLIN1O75477 346 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 POMCP01189 267 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 PFKMP08237 780 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 GABRB2P47870 512 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 CDK7P50613 346 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ZNF268Q14587 947 aaPredicted RBP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ADAT2Q7Z6V5 191 aaKnown RBP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ECHDC2Q86YB7 292 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 IPO4Q8TEX9 1081 aaKnown RBP15.24■□□□□ 0.03
CLDN18-203ENST00000479660 PLVAPQ9BX97 442 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 SEZ6LQ9BYH1 1024 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 ZNF446Q9NWS9 450 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 HESX1Q9UBX0 185 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
CLDN18-203ENST00000479660 WARSP23381 471 aaKnown RBP15.23■□□□□ 0.03
CLDN18-203ENST00000479660 RPL9P32969 192 aaKnown RBP15.23■□□□□ 0.03
CLDN18-203ENST00000479660 MAN1A1P33908 653 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 SSR1P43307 286 aaKnown RBP15.23■□□□□ 0.03
CLDN18-203ENST00000479660 GSCP56915 257 aaPredicted RBP15.23■□□□□ 0.03
CLDN18-203ENST00000479660 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 ARHGAP17Q68EM7 881 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 TTC30AQ86WT1 665 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 RHOT1Q8IXI2 618 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 HNRNPLLQ8WVV9 542 aaKnown RBP15.23■□□□□ 0.03
CLDN18-203ENST00000479660 TNIP3Q96KP6 325 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 LPIN3Q9BQK8 851 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 RNF208Q9H0X6 261 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 RGS18Q9NS28 235 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 STIM2Q9P246 746 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 INPP5FQ9Y2H2 1132 aa15.23■□□□□ 0.03
CLDN18-203ENST00000479660 SART1O43290 800 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms