RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 TRIM29Q14134 588 aa18.78■□□□□ 0.6
HMGN1-212ENST00000479586 SOWAHCQ53LP3 525 aaPredicted RBP18.78■□□□□ 0.6
HMGN1-212ENST00000479586 C19orf48Q6RUI8 117 aa18.78■□□□□ 0.6
HMGN1-212ENST00000479586 NSUN7Q8NE18 718 aaKnown RBP18.78■□□□□ 0.6
HMGN1-212ENST00000479586 TTC16Q8NEE8 873 aa18.78■□□□□ 0.6
HMGN1-212ENST00000479586 MDGA1Q8NFP4 955 aa18.78■□□□□ 0.6
HMGN1-212ENST00000479586 COL26A1Q96A83 441 aa18.78■□□□□ 0.6
HMGN1-212ENST00000479586 PTPRDP23468 1912 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 HAPLN1P10915 354 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-212ENST00000479586 DDX6P26196 483 aaKnown RBP eCLIP18.77■□□□□ 0.6
HMGN1-212ENST00000479586 SEC13P55735 322 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 LMAN2Q12907 356 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 MTF1Q14872 753 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 RINT1Q6NUQ1 792 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 ZPBP2Q6X784 338 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 PIP4P1Q86T03 277 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 LRRTM3Q86VH5 581 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 TMEM161BQ8NDZ6 487 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 SNX29Q8TEQ0 813 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 EXOC4Q96A65 974 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 CNOT6LQ96LI5 555 aaKnown RBP18.77■□□□□ 0.6
HMGN1-212ENST00000479586 ABI2Q9NYB9 513 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-212ENST00000479586 LRWD1Q9UFC0 647 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 WNT6Q9Y6F9 365 aa18.77■□□□□ 0.6
HMGN1-212ENST00000479586 CELSR3Q9NYQ7 3312 aa18.77■□□□□ 0.59
HMGN1-212ENST00000479586 TNRC6BQ9UPQ9 1833 aaKnown RBP18.77■□□□□ 0.59
HMGN1-212ENST00000479586 PI4KAP42356 2102 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 XPOTO43592 962 aaKnown RBP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 CAPNS1P04632 268 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 CYP11A1P05108 521 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 MAPTP10636 758 aaKnown RBP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 ENGP17813 658 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 FXR2P51116 673 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 GUCY1B3Q02153 619 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 ENOX2Q16206 610 aaKnown RBP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 ME3Q16798 604 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 C2orf27AQ580R0 203 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 C1orf186Q6ZWK4 172 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 ARMCX6Q7L4S7 300 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 MON1AQ86VX9 555 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 PROSER1Q86XN7 944 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 USP33Q8TEY7 942 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 GTF3C6Q969F1 213 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 NTPCRQ9BSD7 190 aaKnown RBP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 NUSAP1Q9BXS6 441 aaKnown RBP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 C17orf75Q9HAS0 396 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 TMEM74BQ9NUR3 256 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 DUS2Q9NX74 493 aaKnown RBP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 DNM3Q9UQ16 869 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 GPSM3Q9Y4H4 160 aa18.76■□□□□ 0.59
HMGN1-212ENST00000479586 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-212ENST00000479586 GPR15P49685 360 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 RAD51AP2Q09MP3 1159 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 ZNF268Q14587 947 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-212ENST00000479586 ZNF77Q15935 545 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 SPATA1Q5VX52 437 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 KCNK18Q7Z418 384 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 TTC30AQ86WT1 665 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 CHCHD4Q8N4Q1 142 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 OSCP1Q8WVF1 389 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 SPIRE2Q8WWL2 714 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 RLN3Q8WXF3 142 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 MRPS31Q92665 395 aaKnown RBP18.75■□□□□ 0.59
HMGN1-212ENST00000479586 ATP2A3Q93084 1043 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 FSCN3Q9NQT6 498 aa18.75■□□□□ 0.59
HMGN1-212ENST00000479586 MAGED2Q9UNF1 606 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-212ENST00000479586 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
HMGN1-212ENST00000479586 SCN1AP35498 2009 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 HELZ2Q9BYK8 2649 aaKnown RBP18.74■□□□□ 0.59
HMGN1-212ENST00000479586 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 PP2D1A8MPX8 630 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 TADA3O75528 432 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 HNRNPLP14866 589 aaKnown RBP eCLIP18.74■□□□□ 0.59
HMGN1-212ENST00000479586 PTGER3P43115 390 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 IFNAR2P48551 515 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 FAM193AP78312 1265 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 USP4Q13107 963 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 SEMA3BQ13214 749 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 ORC2Q13416 577 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-212ENST00000479586 EML3Q32P44 896 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 TTC38Q5R3I4 469 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 SDHAF4Q5VUM1 108 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 C9orf57Q5W0N0 161 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 JADE1Q6IE81 842 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 PDZD3Q86UT5 571 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 TMEFF1Q8IYR6 380 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 CCDC33Q8N5R6 958 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 FRMD1Q8N878 549 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 C4orf32Q8N8J7 132 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 OLIG1Q8TAK6 271 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 C2orf15Q8WU43 125 aaKnown RBP18.74■□□□□ 0.59
HMGN1-212ENST00000479586 FNBP1Q96RU3 617 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 SLC22A12Q96S37 553 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 MMP17Q9ULZ9 603 aa18.74■□□□□ 0.59
HMGN1-212ENST00000479586 MYH11P35749 1972 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 ASH1LQ9NR48 2969 aaKnown RBP18.73■□□□□ 0.59
HMGN1-212ENST00000479586 FAM221BA6H8Z2 402 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 K7EQS6 105 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 TNFRSF10BO14763 440 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms