RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DMRTA2Q96SC8 542 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 B3GNT5Q9BYG0 378 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 TDP1Q9NUW8 608 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 INTS13Q9NVM9 706 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 CALCOCO1Q9P1Z2 691 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 ARPP21Q9UBL0 812 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 POLHQ9Y253 713 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 ARAP1Q96P48 1450 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 FHAD1B1AJZ9 1412 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 TDRD9Q8NDG6 1382 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 KIF13AQ9H1H9 1805 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 A0A088AWK7 358 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 AGFG2O95081 481 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 ARIH2O95376 493 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 MYBP10242 640 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 GPD1P21695 349 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 CACNB3P54284 484 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 KRTAP10-11P60412 298 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 ATP8B2P98198 1209 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 FPGSQ05932 587 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 TARDBPQ13148 414 aaKnown RBP eCLIP5.03□□□□□ -1.62e-9■■■■□ 20.3
CDC42BPA-212ENST00000478573 NOGQ13253 232 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 CD300EQ496F6 205 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 ZNF788Q6ZQV5 615 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 CLNKQ7Z7G1 428 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 DCBLD1Q8N8Z6 715 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 FAM156AQ8NDB6 213 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 KLHDC4Q8TBB5 520 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 NR2E3Q9Y5X4 410 aa5.03□□□□□ -1.6
CDC42BPA-212ENST00000478573 PLEKHD1A6NEE1 506 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 DNAJC9-AS1A6NH13 148 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 CAPN8A6NHC0 703 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 GOLIM4O00461 696 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 PMM2O15305 246 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 FRS3O43559 492 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 PROP1O75360 226 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 FTLP02792 175 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 CHRM2P08172 466 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 KCNA2P16389 499 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 SLC6A4P31645 630 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 PROK1P58294 105 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 ZNF280AP59817 542 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 CTXN1P60606 82 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 GPSM2P81274 684 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 ZNF844Q08AG5 666 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 BRD3Q15059 726 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 LLGL1Q15334 1064 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 DACT2Q5SW24 774 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 UTP14CQ5TAP6 766 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 VWA1Q6PCB0 445 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 DARS2Q6PI48 645 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 CCDC149Q6ZUS6 474 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 DAAM2Q86T65 1068 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 KRT78Q8N1N4 520 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 SH2D3CQ8N5H7 860 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 Q8NA96 180 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 C3orf20Q8ND61 904 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 IFI44Q8TCB0 444 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 LPIN2Q92539 896 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 SMG7Q92540 1137 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 RIPOR2Q9Y4F9 1068 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 COMMD10Q9Y6G5 202 aa5.02□□□□□ -1.61
CDC42BPA-212ENST00000478573 ARID4BQ4LE39 1312 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 PRAMEF33A0A0G2JMD5 474 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 MANSC4A6NHS7 340 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 TOR1BO14657 336 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 GRM6O15303 877 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 MPPED1O15442 326 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 PRAMEF10O60809 474 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 FTH1P19P0C7X4 201 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 SLC5A1P13866 664 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 HTR3AP46098 478 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 RPS7P62081 194 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 RAB1AP62820 205 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 NKX6-1P78426 367 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 TLE1Q04724 770 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 KIAA0753Q2KHM9 967 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 IL31Q6EBC2 164 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 SWSAP1Q6NVH7 229 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 MAEAQ7L5Y9 396 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 AMIGO2Q86SJ2 522 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 NSUN7Q8NE18 718 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 PLBD2Q8NHP8 589 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 CLPTM1LQ96KA5 538 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 STRBPQ96SI9 672 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 PSMD1Q99460 953 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 MPHOSPH6Q99547 160 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 PACSIN1Q9BY11 444 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 CHMP4AQ9BY43 222 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 BHMT2Q9H2M3 363 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 FAM50BQ9Y247 325 aa5.01□□□□□ -1.61
CDC42BPA-212ENST00000478573 IQGAP2Q13576 1575 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 KIF27Q86VH2 1401 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 A0A1W2PS29 197 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 CCDC151A5D8V7 595 aa5□□□□□ -1.61
CDC42BPA-212ENST00000478573 IFIT2P09913 472 aaKnown RBP5□□□□□ -1.61
CDC42BPA-212ENST00000478573 SBK3P0C264 359 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms