RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 PLA2G6O60733 806 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 FZD7O75084 574 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 PRDM1O75626 825 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 RBM5P52756 815 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 UBE2HP62256 183 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 KRT85P78386 507 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 AKAP17AQ02040 695 aaKnown RBP6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 ADCY1Q08828 1119 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 GRM7Q14831 915 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 USP39Q53GS9 565 aaKnown RBP6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 ASPRV1Q53RT3 343 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 FAM47AQ5JRC9 791 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 GPATCH4Q5T3I0 446 aaKnown RBP6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 MICU3Q86XE3 530 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 OR5AN1Q8NGI8 311 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 MAF1Q9H063 256 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 TDRD3Q9H7E2 651 aaKnown RBP6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 MYOZ2Q9NPC6 264 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 INTS7Q9NVH2 962 aaKnown RBP6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 MAGEL2Q9UJ55 1249 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 PPP2R3BQ9Y5P8 575 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 DLEC1Q9Y238 1755 aa6.61□□□□□ -1.35
CDKN1B-204ENST00000477087 MAST2Q6P0Q8 1798 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 ESYT2A0FGR8 921 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 PMS2P1A4D2B8 440 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 MAFGO15525 162 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 LETM1O95202 739 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 YEATS4O95619 227 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 NCLP19338 710 aaKnown RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 SLC9A1P19634 815 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 CALML3P27482 149 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 TRAPPC10P48553 1259 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 KIF23Q02241 960 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 HGFACQ04756 655 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 FOXL1Q12952 345 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 TRAF1Q13077 416 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 TRIM29Q14134 588 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 EPHA7Q15375 998 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 PFKFB3Q16875 520 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 CERKLQ49MI3 558 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 RILPL1Q5EBL4 403 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 KRT40Q6A162 431 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 BTNL9Q6UXG8 535 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 Q6ZSN1 163 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 ZFPM1Q8IX07 1006 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 ELOA2Q8IYF1 753 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 SRBD1Q8N5C6 995 aaKnown RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 GMCL1P1Q8NEA9 526 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 GCDHQ92947 438 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 SLC7A6OSQ96CW6 309 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 MTMR8Q96EF0 704 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 CEP95Q96GE4 821 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 TMEM176AQ96HP8 235 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 GLT8D2Q9H1C3 349 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 PIF1Q9H611 641 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 DNAJC18Q9H819 358 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 MAD2L2Q9UI95 211 aa6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 CNOT7Q9UIV1 285 aaKnown RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 CTDP1Q9Y5B0 961 aaPredicted RBP6.6□□□□□ -1.35
CDKN1B-204ENST00000477087 FAM237AA0A1B0GTK4 181 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 VPS37CA5D8V6 355 aaPredicted RBP6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 GAS7O60861 476 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 PPP6R2O75170 966 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 BMP15O95972 392 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 MMP1P03956 469 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 PARP1P09874 1014 aaKnown RBP6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 AKR1B1P15121 316 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 PRELPP51888 382 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 BCAR1P56945 870 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 ATP2C1P98194 919 aaPredicted RBP6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 ORC2Q13416 577 aaPredicted RBP6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 PICALMQ13492 652 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 RIN1Q13671 783 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 ADALQ6DHV7 355 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 MAMDC4Q6UXC1 1216 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 RNF207Q6ZRF8 634 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 GPR135Q8IZ08 494 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 D2HGDHQ8N465 521 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 ZNF808Q8N4W9 903 aaPredicted RBP6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 C7orf31Q8N865 590 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 SLC44A5Q8NCS7 719 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 CCDC12Q8WUD4 166 aaPredicted RBP6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 NUP133Q8WUM0 1156 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 RABGGTAQ92696 567 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 SLC26A6Q9BXS9 759 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 CSRNP2Q9H175 543 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 TLR9Q9NR96 1032 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 GPRC5DQ9NZD1 345 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 KCMF1Q9P0J7 381 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 SAP30BPQ9UHR5 308 aaKnown RBP6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 ZNF112Q9UJU3 913 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 PNMA2Q9UL42 364 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 STX8Q9UNK0 236 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 TMX2Q9Y320 296 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 CCDC88AQ3V6T2 1871 aa6.59□□□□□ -1.35
CDKN1B-204ENST00000477087 CNTNAP1P78357 1384 aa6.58□□□□□ -1.36
CDKN1B-204ENST00000477087 CHD4Q14839 1912 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms