RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 MRPS17Q9Y2R5 130 aaKnown RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 TIMM13Q9Y5L4 95 aaPredicted RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 ALG6Q9Y672 507 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 PITPNM2Q9BZ72 1349 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 PFKFB2O60825 505 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 GNSP15586 552 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 ALAS2P22557 587 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 EIF4A3P38919 411 aaKnown RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 FOXM1Q08050 763 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TRIM71Q2Q1W2 868 aaKnown RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D16Q8TBP0 767 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 DNAJB3Q8WWF6 145 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 NACC2Q96BF6 587 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 ZNF558Q96NG5 402 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 PIH1D3Q9NQM4 214 aaKnown RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 THEGQ9P2T0 379 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 PCDHGB3Q9Y5G1 929 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3DA0A087WVF3 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3IA0A087WXS9 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3EA0A087X179 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3KA0A087X1G2 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3FA6NER0 549 aaPredicted RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3LB9A6J9 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 CXCL14O95715 111 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3HP0C7X1 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 SPATA31D3P0C874 917 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 LAMB3Q13751 1172 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 USP10Q14694 798 aaKnown RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 EMC2Q15006 297 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 ME3Q16798 604 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 WHAMMP3Q1A5X7 153 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 XKR3Q5GH77 459 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3GQ6DHY5 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3CQ6IPX1 549 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 SPATA31D4Q6ZUB0 917 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TBC1D3Q8IZP1 549 aaPredicted RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 AHI1Q8N157 1196 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 SRBD1Q8N5C6 995 aaKnown RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 CHST13Q8NET6 341 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 CEP70Q8NHQ1 597 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 ZMAT2Q96NC0 199 aaKnown RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 CAMKK2Q96RR4 588 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 ZDHHC6Q9H6R6 413 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 EPB41L5Q9HCM4 733 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 MIEF1Q9NQG6 463 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 C20orf96Q9NUD7 363 aaPredicted RBP6.97□□□□□ -1.29
TTC3-215ENST00000476784 USP6P35125 1406 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 TRAPPC8Q9Y2L5 1435 aa6.97□□□□□ -1.29
TTC3-215ENST00000476784 VWA5AO00534 786 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 PSMD3O43242 534 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 CPSF4O95639 269 aaKnown RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 NR3C1P04150 777 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 CYP19A1P11511 503 aaPredicted RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 PDGFRAP16234 1089 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 EIF3EP60228 445 aaKnown RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 ZNF544Q6NX49 715 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 CYP20A1Q6UW02 462 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 DHTKD1Q96HY7 919 aaPredicted RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 NT5C1AQ9BXI3 368 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 FANCLQ9NW38 375 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 TLR7Q9NYK1 1049 aaKnown RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 KANSL3Q9P2N6 904 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 SUCOQ9UBS9 1254 aaKnown RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 DUOX2Q9NRD8 1548 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 ASAP2O43150 1006 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 SRP72O76094 671 aaKnown RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 AKR1B1P15121 316 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 TCP1P17987 556 aaKnown RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 WASP42768 502 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 MASP1P48740 699 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 ATP12AP54707 1039 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 CHADLQ6NUI6 762 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 UGT3A1Q6NUS8 523 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 ESRP1Q6NXG1 681 aaKnown RBP6.96□□□□□ -1.29
TTC3-215ENST00000476784 TRAPPC5Q8IUR0 188 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 OSBPL9Q96SU4 736 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 PHACTR1Q9C0D0 580 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 ADNPQ9H2P0 1102 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 ARMC7Q9H6L4 198 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 PLEKHG2Q9H7P9 1386 aa6.96□□□□□ -1.29
TTC3-215ENST00000476784 ZNF536O15090 1300 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 E9PBE3 544 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 OR10H2O60403 315 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 KPNA6O60684 536 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 DNTTP04053 509 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 NR3C2P08235 984 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 BEX3Q00994 111 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 RBBP4Q09028 425 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 FAM133BQ5BKY9 247 aaKnown RBP6.96□□□□□ -1.3
TTC3-215ENST00000476784 IFNEQ86WN2 208 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 ALLCQ8N6M5 410 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 PPP1R13LQ8WUF5 828 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 EXOSC4Q9NPD3 245 aaKnown RBP6.96□□□□□ -1.3
TTC3-215ENST00000476784 DDIT4Q9NX09 232 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 PCDHA13Q9Y5I0 950 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 PCF11O94913 1555 aaKnown RBP6.96□□□□□ -1.3
TTC3-215ENST00000476784 HEG1Q9ULI3 1381 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 CNTNAP2Q9UHC6 1331 aa6.96□□□□□ -1.3
TTC3-215ENST00000476784 PGRMC1O00264 195 aaKnown RBP6.96□□□□□ -1.3
TTC3-215ENST00000476784 TBX3O15119 743 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms