RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 C4orf47A7E2U8 309 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 TRDMT1O14717 391 aaKnown RBP12.93□□□□□ -0.34
HDAC6-219ENST00000476625 PIGRP01833 764 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 CYP11A1P05108 521 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 NOVA1P51513 510 aaKnown RBP12.93□□□□□ -0.34
HDAC6-219ENST00000476625 SEC13P55735 322 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 GRSF1Q12849 480 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC6-219ENST00000476625 BFSP1Q12934 665 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 TAF12Q16514 161 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 DDR2Q16832 855 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 CRELD2Q6UXH1 353 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-219ENST00000476625 OSTM1Q86WC4 334 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 SYNPOQ8N3V7 929 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 GCNAQ96QF7 691 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 TRPC7Q9HCX4 862 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 ZDHHC4Q9NPG8 344 aa12.93□□□□□ -0.34
HDAC6-219ENST00000476625 LAMA1P25391 3075 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 ABCA7Q8IZY2 2146 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 CEP192Q8TEP8 1941 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 XPOTO43592 962 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 PRPF40AO75400 957 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 FAM13AO94988 1023 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 CYP2F1P24903 491 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 WEE1P30291 646 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 AVPR1AP37288 418 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 TUFMP49411 452 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 HMGN5P82970 282 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 SHC2P98077 582 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 KCNA1Q09470 495 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 MESP2Q0VG99 397 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 DMC1Q14565 340 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 KIAA1211LQ6NV74 962 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 FRMD1Q8N878 549 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 ZC3H10Q96K80 434 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 P2RY13Q9BPV8 354 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 TDP1Q9NUW8 608 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 DPP3Q9NY33 737 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 LARSQ9P2J5 1176 aaKnown RBP12.92□□□□□ -0.34
HDAC6-219ENST00000476625 ZMIZ1Q9ULJ6 1067 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
HDAC6-219ENST00000476625 C2orf78A6NCI8 922 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 LAD1O00515 517 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 TRAK2O60296 914 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 FGF19O95750 216 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 PLCG1P19174 1290 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 GBP1P32455 592 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 TAF6P49848 677 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 ZXDBP98169 803 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 ZNF252P-AS1Q0IIN9 211 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 MTF1Q14872 753 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 ZNF77Q15935 545 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 METTL23Q86XA0 190 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 SPPL2BQ8TCT7 592 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 LOXL4Q96JB6 756 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 ECT2Q9H8V3 914 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 L1RE1Q9UN81 338 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
HDAC6-219ENST00000476625 ATXN2Q99700 1313 aaKnown RBP12.9□□□□□ -0.34
HDAC6-219ENST00000476625 ATP2C2O75185 946 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 CAVIN2O95810 425 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 PROS1P07225 676 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 POLR2BP30876 1174 aaKnown RBP12.9□□□□□ -0.34
HDAC6-219ENST00000476625 DGKEP52429 567 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 ZNF131P52739 623 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 USP4Q13107 963 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 COL9A2Q14055 689 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-219ENST00000476625 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 EML3Q32P44 896 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 C2orf27AQ580R0 203 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 ADALQ6DHV7 355 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 ARMCX6Q7L4S7 300 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 MON1AQ86VX9 555 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 TTC30AQ86WT1 665 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 PDCL2Q8N4E4 241 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 CCDC33Q8N5R6 958 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 ARL14EPQ8N8R7 260 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-219ENST00000476625 DDX1Q92499 740 aaKnown RBP12.9□□□□□ -0.34
HDAC6-219ENST00000476625 CD101Q93033 1021 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 SAAL1Q96ER3 474 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 TMEM121BQ9BXQ6 578 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-219ENST00000476625 FGFBP2Q9BYJ0 223 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 DUS2Q9NX74 493 aaKnown RBP12.9□□□□□ -0.34
HDAC6-219ENST00000476625 HSFX1Q9UBD0 423 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 GTF3C4Q9UKN8 822 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 AGO2Q9UKV8 859 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms