RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 SCN1AP35498 2009 aa11.67□□□□□ -0.54
CDRT1-205ENST00000475944 TRDMT1O14717 391 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 EXTL3O43909 919 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 HUS1O60921 280 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 PRPF40AO75400 957 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 RPP40O75818 363 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 PPP1R37O75864 691 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 LDHAP00338 332 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 CCDC192P0DO97 292 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 ADSSP30520 456 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 POLR2BP30876 1174 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 RPL10AP62906 217 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 TFAMQ00059 246 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 PDGFRLQ15198 375 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 AASDHQ4L235 1098 aaPredicted RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 IL31Q6EBC2 164 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 CACNA2D4Q7Z3S7 1137 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 TMEM150AQ86TG1 271 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 C12orf50Q8NA57 414 aaPredicted RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 CACTINQ8WUQ7 758 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 USP13Q92995 863 aaPredicted RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 FAM213AQ9BRX8 229 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 PI4K2AQ9BTU6 479 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 EBF3Q9H4W6 596 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 MRPL44Q9H9J2 332 aaKnown RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 MAGED2Q9UNF1 606 aaPredicted RBP11.66□□□□□ -0.54
CDRT1-205ENST00000475944 SLC8A2Q9UPR5 921 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 CCL26Q9Y258 94 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 NCOR2Q9Y618 2525 aa11.66□□□□□ -0.54
CDRT1-205ENST00000475944 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
CDRT1-205ENST00000475944 AXIN1O15169 862 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 GDF9O60383 454 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 AKAP3O75969 853 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 GCNT3O95395 438 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 ITGB3P05106 788 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 GAP43P17677 238 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 DRD1P21728 446 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 TXLNAP40222 546 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 LIMK1P53667 647 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 MYL7Q01449 175 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
CDRT1-205ENST00000475944 FBXO43Q4G163 708 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 L1TD1Q5T7N2 865 aaKnown RBP11.65□□□□□ -0.54
CDRT1-205ENST00000475944 TXNDC8Q6A555 127 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 TRIM68Q6AZZ1 485 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 FSTL4Q6MZW2 842 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 PKN3Q6P5Z2 889 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 MON1AQ86VX9 555 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 BRSK2Q8IWQ3 736 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 TMEM86AQ8N2M4 240 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 PDCL2Q8N4E4 241 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 CPA6Q8N4T0 437 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 CAMKK1Q8N5S9 505 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 LRRC52Q8N7C0 313 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 SPATA18Q8TC71 538 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 TRMT2BQ96GJ1 504 aaKnown RBP11.65□□□□□ -0.54
CDRT1-205ENST00000475944 EPSTI1Q96J88 318 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 ACCSQ96QU6 501 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 ACBD6Q9BR61 282 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 STRA6Q9BX79 667 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 ARRDC1-AS1Q9H2J1 176 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 IKZF4Q9H2S9 585 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 TMLHEQ9NVH6 421 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 DDX43Q9NXZ2 648 aaKnown RBP11.65□□□□□ -0.54
CDRT1-205ENST00000475944 RBAKQ9NYW8 714 aaPredicted RBP11.65□□□□□ -0.54
CDRT1-205ENST00000475944 ITGA11Q9UKX5 1188 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 L1RE1Q9UN81 338 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 AGAP1Q9UPQ3 857 aa11.65□□□□□ -0.54
CDRT1-205ENST00000475944 OTOL1A6NHN0 477 aaPredicted RBP11.64□□□□□ -0.55
CDRT1-205ENST00000475944 RNF40O75150 1001 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 NOL4O94818 638 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 EPN2O95208 641 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 EGFP01133 1207 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 ZNF806P0C7X5 589 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 ARSAP15289 507 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 GARTP22102 1010 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 KCNA4P22459 653 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 PCSK1P29120 753 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 HOXC13P31276 330 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 RAP1GAPP47736 663 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 PXNP49023 591 aaPredicted RBP11.64□□□□□ -0.55
CDRT1-205ENST00000475944 GPR15P49685 360 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 FAM160A1Q05DH4 1040 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 ALCAMQ13740 583 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 MTF1Q14872 753 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 DDR2Q16832 855 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 INTS6LQ5JSJ4 861 aaKnown RBP11.64□□□□□ -0.55
CDRT1-205ENST00000475944 RRAGBQ5VZM2 374 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 SV2BQ7L1I2 683 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 SYCP3Q8IZU3 236 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 C1orf127Q8N9H9 656 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 FSIP1Q8NA03 581 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 STKLD1Q8NE28 680 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 CHFRQ96EP1 664 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 P2RY13Q9BPV8 354 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 TMEM206Q9H813 350 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 OLFML3Q9NRN5 406 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms