RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 MAGEB3O15480 346 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 HIP1RO75146 1068 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 AKAP3O75969 853 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 THRAP10827 490 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 TRIM21P19474 475 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 RPA3P35244 121 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 SOX5P35711 763 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 CDKL1Q00532 357 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 LRRC41Q15345 812 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 SPA17Q15506 151 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ARTNQ5T4W7 220 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 AGAP7PQ5VUJ5 663 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 RIPOR1Q6ZS17 1223 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 TAOK1Q7L7X3 1001 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NLRP9Q7RTR0 991 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 CPLX4Q7Z7G2 160 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 RIOX2Q8IUF8 465 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NIPA2Q8N8Q9 360 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 PDPRQ8NCN5 879 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 STARD8Q92502 1023 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ARHGEF2Q92974 986 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 NKD2Q969F2 451 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 SDCCAG3Q96C92 435 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 MPHOSPH6Q99547 160 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 B3GNT4Q9C0J1 378 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NXF2Q9GZY0 626 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 CDH19Q9H159 772 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 VCXQ9H320 206 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 GOLPH3Q9H4A6 298 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 SUDS3Q9H7L9 328 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 ITGA11Q9UKX5 1188 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 EMCNQ9ULC0 261 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NOX1Q9Y5S8 564 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 SNCAIPQ9Y6H5 919 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NUP210Q8TEM1 1887 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 H3BNH8 94 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 KRIT1O00522 736 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 KCNK3O14649 394 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 SLC22A2O15244 555 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CBFA2T3O75081 653 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PRSS23O95084 383 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 GAS8O95995 478 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 OR52Z1P0C646 297 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 RBP3P10745 1247 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 ZNF12P17014 697 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PRKCHP24723 683 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CIITAP33076 1130 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 RANBP1P43487 201 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 VCPP55072 806 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 AQP4P55087 323 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PPP4CP60510 307 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 LACTBP83111 547 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 ZNF252P-AS1Q0IIN9 211 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 STRN3Q13033 797 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PUM3Q15397 648 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 KCTD21Q4G0X4 260 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PIGGQ5H8A4 983 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 SH2D4BQ5SQS7 431 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 KIAA1841Q6NSI8 718 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 FAM117BQ6P1L5 589 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CPNE8Q86YQ8 564 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 TMPRSS6Q8IU80 811 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 LRRC49Q8IUZ0 686 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 MFSD4AQ8N468 514 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 ANGPTL6Q8NI99 470 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 STAMQ92783 540 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 WBP1Q96G27 269 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 VMP1Q96GC9 406 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 VCX3BQ9H321 246 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 TPK1Q9H3S4 243 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 VCX3AQ9NNX9 186 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 UTP11Q9Y3A2 253 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 CNTNAP1P78357 1384 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 FRMPD2Q68DX3 1309 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 A0A1B0GTW7 788 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 AQP9O43315 295 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 ADAMTS2O95450 1211 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 HSPA1AP0DMV8 641 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 HSPA1BP0DMV9 641 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 SKIP12755 728 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 JUNDP17535 347 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 SLC9A1P19634 815 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 RRM1P23921 792 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CALML3P27482 149 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 GNA11P29992 359 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PPP2R5CQ13362 524 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 RCN2Q14257 317 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 ARL13BQ3SXY8 428 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PHLDB3Q6NSJ2 640 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 ALKBH5Q6P6C2 394 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 PHLDB2Q86SQ0 1253 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 TTC5Q8N0Z6 440 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 HMGCLL1Q8TB92 370 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CAGE1Q8TC20 777 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 LRRC8CQ8TDW0 803 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 APBB2Q92870 758 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 NSL1Q96IY1 281 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 NAP1L4Q99733 375 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 TRAF4Q9BUZ4 470 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 DHX33Q9H6R0 707 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms