RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 WDR59Q6PJI9 974 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 PRSS55Q6UWB4 352 aaPredicted RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 IRF2BP2Q7Z5L9 587 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 NOP9Q86U38 636 aaKnown RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 ZNF677Q86XU0 584 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 TMTC1Q8IUR5 882 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 RNF168Q8IYW5 571 aaPredicted RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 OR10T2Q8NGX3 314 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 PIK3R5Q8WYR1 880 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 MYLPFQ96A32 169 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 CCDC42Q96M95 316 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 AGPAT1Q99943 283 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 ACBD6Q9BR61 282 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 MED10Q9BTT4 135 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 VN1R3Q9BXE9 311 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 ZBP1Q9H171 429 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 SLC28A3Q9HAS3 691 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 TLR9Q9NR96 1032 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 MRPL17Q9NRX2 175 aaKnown RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 HESX1Q9UBX0 185 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 NOCTQ9UK39 431 aaKnown RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 SSU72P8A0A1W2PR75 194 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 C5orf67F2Z3F1 127 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ARHGAP6O43182 974 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 OAZ2O95190 189 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 EFEMP2O95967 443 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 RB1P06400 928 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 MMEP08473 750 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 CCDC130P13994 396 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 PTPN1P18031 435 aaKnown RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 TNFAIP3P21580 790 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 FECHP22830 423 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ANXA13P27216 316 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ADORA2BP29275 332 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 DEKP35659 375 aaKnown RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 EIF4A3P38919 411 aaKnown RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 KIF11P52732 1056 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ARPP19P56211 112 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ERVK-21P61565 698 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 CCZ1BP86790 482 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 CDK17Q00537 523 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 CDR2Q01850 454 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 DSG1Q02413 1049 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 TAP1Q03518 808 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 UBE3AQ05086 875 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 MAPK8IP2Q13387 824 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 CCDC142Q17RM4 750 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 SLC39A12Q504Y0 691 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 PLPP4Q5VZY2 271 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 C4orf50Q6ZRC1 276 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 TAS1R1Q7RTX1 841 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ZNF571Q7Z3V5 609 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 TMC7Q7Z402 723 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 SPRED2Q7Z698 418 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 SPATA2LQ8IUW3 424 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 TMEM139Q8IV31 216 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 PASD1Q8IV76 773 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 GLYCTKQ8IVS8 523 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 DCP1BQ8IZD4 617 aaKnown RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 C12orf29Q8N999 325 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 SLC2A14Q8TDB8 520 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 POF1BQ8WVV4 589 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ZNF606Q8WXB4 792 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ARNTL2Q8WYA1 636 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 TIFAQ96CG3 184 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 CYFIP2Q96F07 1278 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 TMEM209Q96SK2 561 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 CHP1Q99653 195 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 TCF25Q9BQ70 676 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 RTP3Q9BQQ7 232 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 OXCT2Q9BYC2 517 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 ZCWPW1Q9H0M4 648 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 NHEJ1Q9H9Q4 299 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 CERS4Q9HA82 394 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ALG13Q9NP73 1137 aaKnown RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 CRTAC1Q9NQ79 661 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.85□□□□□ -0.99
CNN3-205ENST00000474409 KRT82Q9NSB4 513 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 ABI2Q9NYB9 513 aaPredicted RBP8.85□□□□□ -0.99
CNN3-205ENST00000474409 MTRRQ9UBK8 725 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 TSPAN16Q9UKR8 245 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 KIAA1257Q9ULG3 409 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.85□□□□□ -0.99
CNN3-205ENST00000474409 LZTS1Q9Y250 596 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 SSX2IPQ9Y2D8 614 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 CDY1Q9Y6F8 540 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 NOTCH4Q99466 2003 aa8.85□□□□□ -0.99
CNN3-205ENST00000474409 A0A1W2PPC1 479 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 MYBPHLA2RUH7 354 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 O00370 1275 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 ATP2C2O75185 946 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 MICAL2O94851 1124 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 OR4Q2P0C623 313 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 FAM200BP0CF97 657 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 CTSAP10619 480 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 RPL17P18621 184 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms