RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NOTCH4Q99466 2003 aa21.94■■□□□ 1.1
SNX13-206ENST00000474067 KRBA1A5PL33 1030 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 MAN2B1O00754 1011 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 TACC1O75410 805 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 NR3C1P04150 777 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 NPR3P17342 541 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 WARSP23381 471 aaKnown RBP21.93■■□□□ 1.1
SNX13-206ENST00000474067 CCR2P41597 374 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 ENPEPQ07075 957 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 DPYDQ12882 1025 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 SNW1Q13573 536 aaKnown RBP21.93■■□□□ 1.1
SNX13-206ENST00000474067 NFIL3Q16649 462 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 VSTM1Q6UX27 236 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 MFSD6LQ8IWD5 586 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 CCDC105Q8IYK2 499 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 GUF1Q8N442 669 aaKnown RBP21.93■■□□□ 1.1
SNX13-206ENST00000474067 DOCK6Q96HP0 2047 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 RPP25Q9BUL9 199 aaKnown RBP21.93■■□□□ 1.1
SNX13-206ENST00000474067 LRRC3Q9BY71 257 aa21.93■■□□□ 1.1
SNX13-206ENST00000474067 KANSL1LA0AUZ9 987 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 IKBKBO14920 756 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 ZNF263O14978 683 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 SMC2O95347 1197 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 GLULP15104 373 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 MAGEA11P43364 429 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 WDR72Q3MJ13 1102 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 TANGO2Q6ICL3 276 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 ZNF852Q6ZMS4 543 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 LRRTM3Q86VH5 581 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 TMC2Q8TDI7 906 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 PARD3BQ8TEW8 1205 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 ATOH1Q92858 354 aaPredicted RBP21.92■■□□□ 1.1
SNX13-206ENST00000474067 SYT15Q9BQS2 421 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 BCO2Q9BYV7 579 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 IMPG2Q9BZV3 1241 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 KCTD10Q9H3F6 313 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 TASP1Q9H6P5 420 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 DMAC2Q9NW81 257 aa21.92■■□□□ 1.1
SNX13-206ENST00000474067 THG1LQ9NWX6 298 aaKnown RBP21.92■■□□□ 1.1
SNX13-206ENST00000474067 MAGEC2Q9UBF1 373 aaPredicted RBP21.92■■□□□ 1.1
SNX13-206ENST00000474067 PTPRJQ12913 1337 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 KRT13P13646 458 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 ATF6P18850 670 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 ANXA13P27216 316 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 HOXD11P31277 338 aaPredicted RBP21.91■■□□□ 1.1
SNX13-206ENST00000474067 PDE6CP51160 858 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 MLLT6P55198 1093 aaPredicted RBP21.91■■□□□ 1.1
SNX13-206ENST00000474067 CLDN10P78369 228 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 TCF15Q12870 199 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 GPR158Q5T848 1215 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 CEP135Q66GS9 1140 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 INTS8Q75QN2 995 aaKnown RBP21.91■■□□□ 1.1
SNX13-206ENST00000474067 LIMS2Q7Z4I7 341 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 TTC9BQ8N6N2 239 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 DTWD2Q8NBA8 298 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 PJA1Q8NG27 643 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 CSGALNACT1Q8TDX6 532 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 MRPS31Q92665 395 aaKnown RBP21.91■■□□□ 1.1
SNX13-206ENST00000474067 TAF4BQ92750 862 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 PI4K2AQ9BTU6 479 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 VRTNQ9H8Y1 702 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 GTF3C4Q9UKN8 822 aa21.91■■□□□ 1.1
SNX13-206ENST00000474067 ZDBF2Q9HCK1 2354 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 ATP8B3O60423 1300 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 TRIM66O15016 1216 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 MOSPD3O75425 235 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 FCARP24071 287 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 GNL1P36915 607 aaPredicted RBP21.9■■□□□ 1.1
SNX13-206ENST00000474067 AVPR1AP37288 418 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 PLCB2Q00722 1185 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 ZNF699Q32M78 642 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 ARHGAP29Q52LW3 1261 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 ZNF667Q5HYK9 610 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 CCDC150Q8NCX0 1101 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 OR6B3Q8NGW1 331 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 TRMT2BQ96GJ1 504 aaKnown RBP21.9■■□□□ 1.1
SNX13-206ENST00000474067 GSDMAQ96QA5 445 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 LPIN3Q9BQK8 851 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 KIF9Q9HAQ2 790 aa21.9■■□□□ 1.1
SNX13-206ENST00000474067 CHADO15335 359 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 GJA1P17302 382 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 NR2F2P24468 414 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 ACAT1P24752 427 aaKnown RBP21.89■■□□□ 1.09
SNX13-206ENST00000474067 GDI1P31150 447 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 PPP1R2P41236 205 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 FAM160A1Q05DH4 1040 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 SGSM1Q2NKQ1 1148 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 FAM171BQ6P995 826 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 GAREM2Q75VX8 874 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 GIPC2Q8TF65 315 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 TNIP3Q96KP6 325 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 TIGD1Q96MW7 591 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 IER2Q9BTL4 223 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 DDX23Q9BUQ8 820 aaKnown RBP21.89■■□□□ 1.09
SNX13-206ENST00000474067 GDPD2Q9HCC8 539 aa21.89■■□□□ 1.09
SNX13-206ENST00000474067 CIZ1Q9ULV3 898 aaPredicted RBP21.89■■□□□ 1.09
SNX13-206ENST00000474067 HEPACAM2A8MVW5 462 aa21.88■■□□□ 1.09
SNX13-206ENST00000474067 STX10O60499 249 aa21.88■■□□□ 1.09
SNX13-206ENST00000474067 SOAT2O75908 522 aa21.88■■□□□ 1.09
SNX13-206ENST00000474067 CST3P01034 146 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms