RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ACAT1P24752 427 aaKnown RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 PSMC1P62191 440 aaKnown RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 CREMQ03060 361 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 CNGA2Q16280 664 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 USP41Q3LFD5 358 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 CTXN3Q4LDR2 81 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 MDH1BQ5I0G3 518 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 SCARA3Q6AZY7 606 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 ACAD10Q6JQN1 1059 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 KCNT2Q6UVM3 1135 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 ANKS3Q6ZW76 656 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 ERICH1Q86X53 443 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 SPATA2LQ8IUW3 424 aaPredicted RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 RHOT2Q8IXI1 618 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 C1orf131Q8NDD1 294 aaKnown RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 LNX1Q8TBB1 728 aaPredicted RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 KBTBD7Q8WVZ9 684 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 CALR3Q96L12 384 aaKnown RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 C16orf45Q96MC5 204 aaPredicted RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 RAD9AQ99638 391 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 ACBD6Q9BR61 282 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 MRPL47Q9HD33 250 aaKnown RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 ACP6Q9NPH0 428 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 ADAM22Q9P0K1 906 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 CTTNBP2NLQ9P2B4 639 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 TSPAN16Q9UKR8 245 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■□□□□ 8.5
PRPF38A-202ENST00000474048 SCINQ9Y6U3 715 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 DNAH12Q6ZR08 3092 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 TSC2P49815 1807 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 MYH10P35580 1976 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 MACROD2A1Z1Q3 448 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 OR6C75A6NL08 312 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 MICAL2O94851 1124 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 TMEM253P0C7T8 217 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 TKTP29401 623 aaKnown RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 GPC5P78333 572 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 BST2Q10589 180 aaKnown RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 NFE2Q16621 373 aaPredicted RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 ASTE1Q2TB18 679 aaPredicted RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 ARHGAP17Q68EM7 881 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 LCLAT1Q6UWP7 414 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 TMCO2Q7Z6W1 182 aaPredicted RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 HERC6Q8IVU3 1022 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 CRYBG2Q8N1P7 616 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 C17orf53Q8N3J3 647 aaPredicted RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 COLGALT1Q8NBJ5 622 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 CPA5Q8WXQ8 436 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 ZNF689Q96CS4 500 aaPredicted RBP10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 TWNKQ96RR1 684 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 C11orf70Q9BRQ4 267 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 TTPALQ9BTX7 342 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 LHX5Q9H2C1 402 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 DPEP3Q9H4B8 488 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 KCND1Q9NSA2 647 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 MYO1AQ9UBC5 1043 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 SSX2IPQ9Y2D8 614 aa10.88□□□□□ -0.67
PRPF38A-202ENST00000474048 FAM170AA1A519 330 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 O00370 1275 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 GABRDO14764 452 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 ZNF500O60304 480 aaPredicted RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CALCAP01258 141 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 ITGB1P05556 798 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CCDC130P13994 396 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CHRNB2P17787 502 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 LMO2P25791 158 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CTNNB1P35222 781 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 PBX3P40426 434 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 ACADSBP45954 432 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 GALCP54803 685 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 ARPP19P56211 112 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 GNG11P61952 73 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 NOMO3P69849 1222 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CENPCQ03188 943 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 PPP1R26Q5T8A7 1209 aaPredicted RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 DNAJC24Q6P3W2 148 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 SYCE1Q8N0S2 351 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 RNF10Q8N5U6 811 aaKnown RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 C12orf29Q8N999 325 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 TRIM58Q8NG06 486 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 SLC30A5Q8TAD4 765 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 SLC2A14Q8TDB8 520 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 WHAMMQ8TF30 809 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 RFFLQ8WZ73 363 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 DDX1Q92499 740 aaKnown RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 ZNF592Q92610 1267 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 GOLGA1Q92805 767 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 SMARCD1Q96GM5 515 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 IGSF21Q96ID5 467 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 VCPIP1Q96JH7 1222 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 UBE2OQ9C0C9 1292 aaKnown RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CWH43Q9H720 699 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 WDR35Q9P2L0 1181 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 CNOT8Q9UFF9 292 aaKnown RBP10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 LCMT1Q9UIC8 334 aa10.87□□□□□ -0.67
PRPF38A-202ENST00000474048 MRPL42Q9Y6G3 142 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms