RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RPL10AP62906 217 aaKnown RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 CYP27A1Q02318 531 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 CBWD6Q4V339 395 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 CBWD3Q5JTY5 395 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 CBWD5Q5RIA9 395 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 PDZD4Q76G19 769 aaPredicted RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 GET4Q7L5D6 327 aaPredicted RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 TTC39CQ8N584 583 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 LEMD2Q8NC56 503 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 FUBP3Q96I24 572 aaKnown RBP eCLIP14.68□□□□□ -0.06
USF1-205ENST00000473969 FAXDC2Q96IV6 333 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 THAP9Q9H5L6 903 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 SMYD3Q9H7B4 428 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 CYP3A43Q9HB55 503 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 ABCB6Q9NP58 842 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 ASAH2Q9NR71 780 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 DNMT3BQ9UBC3 853 aaKnown RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 MRPS23Q9Y3D9 190 aaKnown RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 ATP8B3O60423 1300 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 MYBPHLA2RUH7 354 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 C2CD4DB7Z1M9 353 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 AFPP02771 609 aaKnown RBP14.67□□□□□ -0.06
USF1-205ENST00000473969 PTPN1P18031 435 aaKnown RBP14.67□□□□□ -0.06
USF1-205ENST00000473969 MARSP56192 900 aaKnown RBP14.67□□□□□ -0.06
USF1-205ENST00000473969 KCNH2Q12809 1159 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 STX1AQ16623 288 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 CAVIN1Q6NZI2 390 aaKnown RBP14.67□□□□□ -0.06
USF1-205ENST00000473969 FAM171BQ6P995 826 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 RBM43Q6ZSC3 357 aaKnown RBP14.67□□□□□ -0.06
USF1-205ENST00000473969 UNC93AQ86WB7 457 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 TRIM59Q8IWR1 403 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 ZDHHC14Q8IZN3 488 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 ELMO3Q96BJ8 720 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 CNOT6LQ96LI5 555 aaKnown RBP14.67□□□□□ -0.06
USF1-205ENST00000473969 TMLHEQ9NVH6 421 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 HCFC1R1Q9NWW0 138 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 ZFP37Q9Y6Q3 630 aaPredicted RBP14.67□□□□□ -0.06
USF1-205ENST00000473969 REV3LO60673 3130 aa14.67□□□□□ -0.06
USF1-205ENST00000473969 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
USF1-205ENST00000473969 SPTBN5Q9NRC6 3674 aaKnown RBP14.66□□□□□ -0.06
USF1-205ENST00000473969 HCRTO43612 131 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 ATP2C2O75185 946 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 SOAT2O75908 522 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 LETM1O95202 739 aaPredicted RBP14.66□□□□□ -0.06
USF1-205ENST00000473969 VNN2O95498 520 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 FGF19O95750 216 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 MYL4P12829 197 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 ANXA13P27216 316 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 ASPAP45381 313 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 YWHAEP62258 255 aaKnown RBP14.66□□□□□ -0.06
USF1-205ENST00000473969 NTHL1P78549 312 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 DNAJB7Q7Z6W7 309 aaPredicted RBP14.66□□□□□ -0.06
USF1-205ENST00000473969 RNF135Q8IUD6 432 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 SCN4BQ8IWT1 228 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 B3GALNT2Q8NCR0 500 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 FEZF2Q8TBJ5 459 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 MYCBPAPQ8TBZ2 947 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 GIPC2Q8TF65 315 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 SEMA4DQ92854 862 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 MYLPFQ96A32 169 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 GCNAQ96QF7 691 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 MED10Q9BTT4 135 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 CRISPLD1Q9H336 500 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 CEP72Q9P209 647 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 COQ4Q9Y3A0 265 aa14.66□□□□□ -0.06
USF1-205ENST00000473969 PMM2O15305 246 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 TPM2P07951 284 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 CSH1P0DML2 217 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 CSH2P0DML3 217 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 ALADP13716 330 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 CD58P19256 250 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 TBXAS1P24557 533 aaPredicted RBP14.65□□□□□ -0.06
USF1-205ENST00000473969 CYP2F1P24903 491 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 GRIK1P39086 918 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 NDST1P52848 882 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 LRMPQ12912 555 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 VSTM1Q6UX27 236 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 TTC9BQ8N6N2 239 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 PSMG2Q969U7 264 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 PCED1BQ96HM7 432 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 NT5C1BQ96P26 610 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 PKMYT1Q99640 499 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 NT5C1AQ9BXI3 368 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 BCO2Q9BYV7 579 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 NAT10Q9H0A0 1025 aaKnown RBP14.65□□□□□ -0.06
USF1-205ENST00000473969 FAM124BQ9H5Z6 455 aaPredicted RBP14.65□□□□□ -0.06
USF1-205ENST00000473969 APOBEC3GQ9HC16 384 aaKnown RBP14.65□□□□□ -0.06
USF1-205ENST00000473969 CRTAC1Q9NQ79 661 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 AVENQ9NQS1 362 aaPredicted RBP14.65□□□□□ -0.06
USF1-205ENST00000473969 LIMD1Q9UGP4 676 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 CDH7Q9ULB5 785 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 VCANP13611 3396 aa14.65□□□□□ -0.06
USF1-205ENST00000473969 PES1O00541 588 aaKnown RBP14.64□□□□□ -0.07
USF1-205ENST00000473969 TRIM66O15016 1216 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 PRKCSHP14314 528 aaPredicted RBP14.64□□□□□ -0.07
USF1-205ENST00000473969 BDNFP23560 247 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 MAGEA11P43364 429 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 DDR2Q16832 855 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms