RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SURF1Q15526 300 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 TFDP3Q5H9I0 405 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 LRRC38Q5VT99 294 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 CAPN12Q6ZSI9 719 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 ERO1BQ86YB8 467 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 CCDC197Q8NCU1 140 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 CCT6BQ92526 530 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 CPB2Q96IY4 423 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 RPF1Q9H9Y2 349 aaKnown RBP15.48■□□□□ 0.07
CBWD3-205ENST00000469687 SAYSD1Q9NPB0 183 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 NAALADL1Q9UQQ1 740 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 CEP83Q9Y592 693 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.48■□□□□ 0.07
CBWD3-205ENST00000469687 LRCH4O75427 683 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 BANF1O75531 89 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 C22orf31O95567 290 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 ITGB3P05106 788 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 CD48P09326 243 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 PECAM1P16284 738 aaPredicted RBP15.48■□□□□ 0.07
CBWD3-205ENST00000469687 HNRNPH1P31943 449 aaKnown RBP15.48■□□□□ 0.07
CBWD3-205ENST00000469687 CETN2P41208 172 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 SLC25A11Q02978 314 aaKnown RBP15.48■□□□□ 0.07
CBWD3-205ENST00000469687 JADE1Q6IE81 842 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 TAX1BP1Q86VP1 789 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 SRRM1Q8IYB3 904 aaKnown RBP15.48■□□□□ 0.07
CBWD3-205ENST00000469687 NIPA2Q8N8Q9 360 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 BBOF1Q8ND07 529 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 GDAP1Q8TB36 358 aa15.48■□□□□ 0.07
CBWD3-205ENST00000469687 SPDYE5A6NIY4 337 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 LACTBL1A8MY62 500 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 ASAP2O43150 1006 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 IFNB1P01574 187 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 ERBB2P04626 1255 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 KRT3P12035 628 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 BRAFP15056 766 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 VCPP55072 806 aaKnown RBP15.47■□□□□ 0.07
CBWD3-205ENST00000469687 GDF10P55107 478 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 PSMC1P62191 440 aaKnown RBP15.47■□□□□ 0.07
CBWD3-205ENST00000469687 GAD2Q05329 585 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 TTLL12Q14166 644 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-205ENST00000469687 TAF5Q15542 800 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 ZNF667Q5HYK9 610 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 FAM182AQ5T1J6 154 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 DRICH1Q6PGQ1 229 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-205ENST00000469687 RELL1Q8IUW5 271 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 DYDC1Q8WWB3 177 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 BCO2Q9BYV7 579 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 SMARCAD1Q9H4L7 1026 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 METTL5Q9NRN9 209 aaKnown RBP15.47■□□□□ 0.07
CBWD3-205ENST00000469687 EURLQ9NYK6 297 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 CENPFP49454 3210 aa15.47■□□□□ 0.07
CBWD3-205ENST00000469687 A0A087WZ62 844 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 TCP11X1B4DZS4 312 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 HBP1O60381 514 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 TCEA3O75764 348 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 GCAP28676 217 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 SCTRP47872 440 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 PLCB3Q01970 1234 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 TFDP1Q14186 410 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 SLC4A11Q8NBS3 891 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 FDXACB1Q9BRP7 624 aaPredicted RBP15.46■□□□□ 0.07
CBWD3-205ENST00000469687 ELOVL4Q9GZR5 314 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 EFCC1Q9HA90 598 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 FGFR1OP2Q9NVK5 253 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 TNFSF13BQ9Y275 285 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 SIGLEC16A6NMB1 481 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 GOLGA8MH3BSY2 632 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 SGK1O00141 431 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 CXCL11O14625 94 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 STAG3L1P0CL83 205 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 INSRRP14616 1297 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 YWHAEP62258 255 aaKnown RBP15.46■□□□□ 0.07
CBWD3-205ENST00000469687 LMNB2Q03252 620 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 TMED2Q15363 201 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 XYLT1Q86Y38 959 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 ANKRD13AQ8IZ07 590 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 CXorf38Q8TB03 319 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 OPTNQ96CV9 577 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 MPHOSPH6Q99547 160 aaKnown RBP15.46■□□□□ 0.07
CBWD3-205ENST00000469687 PCSK1NQ9UHG2 260 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 LGALS13Q9UHV8 139 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 TPX2Q9ULW0 747 aaKnown RBP15.46■□□□□ 0.07
CBWD3-205ENST00000469687 KCNH4Q9UQ05 1017 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 CITO14578 2027 aa15.46■□□□□ 0.07
CBWD3-205ENST00000469687 ZSWIM8A7E2V4 1837 aa15.46■□□□□ 0.06
CBWD3-205ENST00000469687 PIK3R2O00459 728 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 CDH16O75309 829 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 VTNP04004 478 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 ATP5DP30049 168 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 PTPN7P35236 360 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 COPS2P61201 443 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 OTUD4Q01804 1114 aaKnown RBP15.45■□□□□ 0.06
CBWD3-205ENST00000469687 TAP1Q03518 808 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 AMHR2Q16671 573 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 RNASEH2BQ5TBB1 312 aaKnown RBP15.45■□□□□ 0.06
CBWD3-205ENST00000469687 DPH6Q7L8W6 267 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 TAB3Q8N5C8 712 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-205ENST00000469687 SLC35B2Q8TB61 432 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 ACTL9Q8TC94 416 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 ADAM33Q9BZ11 813 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms