RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 KATNAL2Q8IYT4 538 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 KRT222Q8N1A0 295 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 NIPA2Q8N8Q9 360 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 ARRDC4Q8NCT1 418 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 APPL2Q8NEU8 664 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 FNIP1Q8TF40 1166 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 KRT35Q92764 455 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 C18orf25Q96B23 403 aaPredicted RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 C18orf8Q96DM3 657 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 BTBD6Q96KE9 485 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 TNIP3Q96KP6 325 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 MCEEQ96PE7 176 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 PPP1R10Q96QC0 940 aaKnown RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 TWNKQ96RR1 684 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 SNX25Q9H3E2 840 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 ZNF446Q9NWS9 450 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 DDX56Q9NY93 547 aaKnown RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 OGFRQ9NZT2 677 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 HMGXB4Q9UGU5 601 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 TSPAN16Q9UKR8 245 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 MYO16Q9Y6X6 1858 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 TCRBV5S1A1TA0A578 114 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ARHGEF37A1IGU5 675 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 FAM187AA6NFU0 413 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 TMEM191CA6NGB0 347 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 SIGLEC16A6NMB1 481 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 A8MXQ7 604 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 SART1O43290 800 aaKnown RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 RAD51CO43502 376 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ZNF623O75123 536 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 CHRNA1P02708 482 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 THP07101 528 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 WARSP23381 471 aaKnown RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 GRK4P32298 578 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 GBP1P32455 592 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 SSTR3P32745 418 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 TNNT3P45378 269 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 MARCKSL1P49006 195 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 RNASE9P60153 205 aaKnown RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 PSMC1P62191 440 aaKnown RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 PDCLQ13371 301 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ZNF211Q13398 564 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ACAP1Q15027 740 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ODF2Q5BJF6 829 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 PPP1R15BQ5SWA1 713 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ARHGAP17Q68EM7 881 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 CCNI2Q6ZMN8 369 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 POLNQ7Z5Q5 900 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 MRPL10Q7Z7H8 261 aaKnown RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 SLC13A5Q86YT5 568 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ZDHHC17Q8IUH5 632 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 ADGRF2Q8IZF7 708 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 TMEM86AQ8N2M4 240 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 C12orf50Q8NA57 414 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 OR6B3Q8NGW1 331 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 EXD1Q8NHP7 514 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 SPATA18Q8TC71 538 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 WNT8BQ93098 351 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 NCAPGQ9BPX3 1015 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 AP1M1Q9BXS5 423 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 DDX47Q9H0S4 455 aaKnown RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 VIPAS39Q9H9C1 493 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 GDF3Q9NR23 364 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 FAM114A2Q9NRY5 505 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 KLK14Q9P0G3 267 aa9.87□□□□□ -0.83
SMC1A-205ENST00000469129 CHORDC1Q9UHD1 332 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 UTP11Q9Y3A2 253 aaKnown RBP9.87□□□□□ -0.83
SMC1A-205ENST00000469129 GOLGA8SH3BPF8 625 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 PTGESO14684 152 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 PPEF2O14830 753 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 GHRP10912 638 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 KRT3P12035 628 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 RPL9P32969 192 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 MLH1P40692 756 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 GPD2P43304 727 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 SSR1P43307 286 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 FNTAP49354 379 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 BCAT1P54687 386 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 SLC8A3P57103 927 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 COPS2P61201 443 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 DR1Q01658 176 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 GUCY2DQ02846 1103 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 BST2Q10589 180 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 GRIK3Q13003 919 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 ORC1Q13415 861 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 DSC3Q14574 896 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 LPIN1Q14693 890 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 CYP1B1Q16678 543 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 HADHQ16836 314 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 TRIM71Q2Q1W2 868 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 C2CD6Q53TS8 623 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 CYP4A22Q5TCH4 519 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 LIMS2Q7Z4I7 341 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 NLRC5Q86WI3 1866 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 XYLT1Q86Y38 959 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 CCDC50Q8IVM0 306 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 AENQ8WTP8 325 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 GRK7Q8WTQ7 553 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms