RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RIOX1Q9H6W3 641 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 ZNHIT2Q9UHR6 403 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 PIPSLA2A3N6 862 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 E9PLN8 166 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 TBC1D4O60343 1298 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 UNC5CO95185 931 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 SPDEFO95238 335 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 ANXA1P04083 346 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 GNAI2P04899 355 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 CFIP05156 583 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 PARP1P09874 1014 aaKnown RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 AVPR1BP47901 424 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 ZNF135P52742 658 aaPredicted RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 RPS16P62249 146 aaKnown RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 HTRA4P83105 476 aaPredicted RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 CHAF1AQ13111 956 aaPredicted RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 RESTQ13127 1097 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 SLC13A2Q13183 592 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 STK3Q13188 491 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 CTBP1Q13363 440 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 DGKKQ5KSL6 1271 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 KLHDC7AQ5VTJ3 777 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 IZUMO3Q5VZ72 239 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 HIBCHQ6NVY1 386 aaPredicted RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 DPY19L2P1Q6NXN4 242 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 MED25Q71SY5 747 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 MICU3Q86XE3 530 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 AOPEPQ8N6M6 819 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 ENAHQ8N8S7 591 aaPredicted RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 OR56A1Q8NGH5 318 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 TBC1D15Q8TC07 691 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 LINC00476Q8WZB0 136 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 SCAMP4Q969E2 229 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 ZC3H10Q96K80 434 aaKnown RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 COQ10AQ96MF6 247 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 VKORC1Q9BQB6 163 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 TINAGL1Q9GZM7 467 aaPredicted RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 SYNPO2LQ9H987 977 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 CERS4Q9HA82 394 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 PADI4Q9UM07 663 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 ATP11BQ9Y2G3 1177 aa6.2□□□□□ -1.42
LSM5-209ENST00000468872 EPN1Q9Y6I3 576 aaPredicted RBP6.2□□□□□ -1.42
LSM5-209ENST00000468872 ZAR1LA6NP61 321 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 TRAPPC10P48553 1259 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 SLFN5Q08AF3 891 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 GRAMD1BQ3KR37 738 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 ERAP2Q6P179 960 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 USP37Q86T82 979 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 CCDC33Q8N5R6 958 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 SLC17A8Q8NDX2 589 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 ASB10Q8WXI3 467 aa6.19□□□□□ -1.42
LSM5-209ENST00000468872 TRMT13Q9NUP7 481 aaKnown RBP6.19□□□□□ -1.42
LSM5-209ENST00000468872 MRPS18AQ9NVS2 196 aaKnown RBP6.19□□□□□ -1.42
LSM5-209ENST00000468872 TMEM233B4DJY2 109 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 F5H423 210 aaPredicted RBP6.18□□□□□ -1.42
LSM5-209ENST00000468872 M0QYG6 137 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 THP07101 528 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 HKR1P10072 659 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 ABCB4P21439 1286 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 IL6STP40189 918 aaPredicted RBP6.18□□□□□ -1.42
LSM5-209ENST00000468872 SLC11A2P49281 568 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 SEC24CP53992 1094 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 MXRA7P84157 204 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 BTKQ06187 659 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 PMS2P11Q13670 270 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 ABHD17BQ5VST6 288 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 TSHZ3Q63HK5 1081 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 LMBRD2Q68DH5 695 aaPredicted RBP6.18□□□□□ -1.42
LSM5-209ENST00000468872 ARMC6Q6NXE6 501 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 TSHZ1Q6ZSZ6 1077 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 MAPKAPK5Q8IW41 473 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 DNAJC5GQ8N7S2 189 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 PDPRQ8NCN5 879 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 POF1BQ8WVV4 589 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 COLEC11Q9BWP8 271 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 BRIP1Q9BX63 1249 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 TLR10Q9BXR5 811 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 IMPG2Q9BZV3 1241 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 ZNF518BQ9C0D4 1074 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 WDR12Q9GZL7 423 aaKnown RBP6.18□□□□□ -1.42
LSM5-209ENST00000468872 RNF181Q9P0P0 153 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 PLEKHM1Q9Y4G2 1056 aa6.18□□□□□ -1.42
LSM5-209ENST00000468872 A0A087WWL8 130 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 A0A1W2PPC4 97 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 APOL1O14791 398 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 KIAA0355O15063 1070 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 TCEA3O75764 348 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 CDKL5O76039 1030 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 FGF18O76093 207 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 KIF20AO95235 890 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 CHEK2O96017 543 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 GRPP07492 148 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 ELANEP08246 267 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 EGR2P11161 476 aaPredicted RBP6.17□□□□□ -1.42
LSM5-209ENST00000468872 PIM1P11309 404 aaPredicted RBP6.17□□□□□ -1.42
LSM5-209ENST00000468872 HARSP12081 509 aaKnown RBP6.17□□□□□ -1.42
LSM5-209ENST00000468872 FCER1AP12319 257 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 TYRP1P17643 537 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms