RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 A8MXQ7 604 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 GABRDO14764 452 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 CETN3O15182 167 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 MAPK13O15264 365 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 TACC1O75410 805 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 PDGFRBP09619 1106 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 CSH1P0DML2 217 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 CSH2P0DML3 217 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ATF6P18850 670 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ANXA13P27216 316 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 AVPR2P30518 371 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 GNL1P36915 607 aaPredicted RBP13.9□□□□□ -0.18
CLRN1-204ENST00000468836 EPHA5P54756 1037 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 NFIL3Q16649 462 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 EDRF1Q3B7T1 1238 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 FAM78AQ5JUQ0 283 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 SCARA3Q6AZY7 606 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.18
CLRN1-204ENST00000468836 SCARA5Q6ZMJ2 495 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 TMC8Q8IU68 726 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ENGASEQ8NFI3 743 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 SHKBP1Q8TBC3 707 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ZSCAN18Q8TBC5 510 aaPredicted RBP13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 SMARCD2Q92925 531 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ELSPBP1Q96BH3 223 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 FUBP3Q96I24 572 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLRN1-204ENST00000468836 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 SLC2A4RGQ9NR83 387 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 TMLHEQ9NVH6 421 aa13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ARIH1Q9Y4X5 557 aaPredicted RBP13.9□□□□□ -0.18
CLRN1-204ENST00000468836 MTCL1Q9Y4B5 1905 aaKnown RBP13.9□□□□□ -0.18
CLRN1-204ENST00000468836 ANK1P16157 1881 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 PSMA7O14818 248 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 STX10O60499 249 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 STAU1O95793 577 aaKnown RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 PLA2G5P39877 138 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 PPP1R2P41236 205 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 VCPP55072 806 aaKnown RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 GPC5P78333 572 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 DLG4P78352 724 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 CFAP221Q4G0U5 840 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 MDH1BQ5I0G3 518 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 GPR158Q5T848 1215 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 TANGO2Q6ICL3 276 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 KBTBD7Q8WVZ9 684 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 ERCC4Q92889 916 aaPredicted RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 MYLPFQ96A32 169 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 E2F7Q96AV8 911 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 ASB16Q96NS5 453 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 RPP25Q9BUL9 199 aaKnown RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 TRMT61BQ9BVS5 477 aaKnown RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 DNAI2Q9GZS0 605 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 BRD9Q9H8M2 597 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 ZNF334Q9HCZ1 680 aaPredicted RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 UXTQ9UBK9 157 aaPredicted RBP13.89□□□□□ -0.19
CLRN1-204ENST00000468836 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 TSC2P49815 1807 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 ATP8B3O60423 1300 aa13.89□□□□□ -0.19
CLRN1-204ENST00000468836 MYBPHLA2RUH7 354 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 IKBKBO14920 756 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 HCRTO43612 131 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 AKAP3O75969 853 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
CLRN1-204ENST00000468836 FAM163BP0C2L3 166 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 CYP2F1P24903 491 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 GRIK1P39086 918 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 PRCPP42785 496 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 GPR15P49685 360 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 CLCN5P51795 746 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 PTPN5P54829 565 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 CLDN10P78369 228 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 CYP4F8P98187 520 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 GRM2Q14416 872 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 DDR2Q16832 855 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 ZACNQ401N2 412 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 MRPS31Q92665 395 aaKnown RBP13.88□□□□□ -0.19
CLRN1-204ENST00000468836 TAF4BQ92750 862 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 TNIP3Q96KP6 325 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 MKNK1Q9BUB5 465 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 GZF1Q9H116 711 aaPredicted RBP13.88□□□□□ -0.19
CLRN1-204ENST00000468836 TBC1D17Q9HA65 648 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
CLRN1-204ENST00000468836 ZNF263O14978 683 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 TRIM66O15016 1216 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 ATP2C2O75185 946 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 MOSPD3O75425 235 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 PSMC3P17980 439 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 LMO2P25791 158 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 AVPR1AP37288 418 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 GCLMP48507 274 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 NUBP1P53384 320 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 ENPEPQ07075 957 aa13.87□□□□□ -0.19
CLRN1-204ENST00000468836 MLF2Q15773 248 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms