RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TRIM7Q9C029 511 aa20.08■□□□□ 0.81
SMC4-209ENST00000468653 WNT8AQ9H1J5 351 aa20.08■□□□□ 0.81
SMC4-209ENST00000468653 DPEP3Q9H4B8 488 aa20.08■□□□□ 0.81
SMC4-209ENST00000468653 HESX1Q9UBX0 185 aa20.08■□□□□ 0.81
SMC4-209ENST00000468653 TUSC3Q13454 348 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 WSCD1Q658N2 575 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 ANKRD33Q7Z3H0 272 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 ZNF572Q7Z3I7 529 aaPredicted RBP20.08■□□□□ 0.8
SMC4-209ENST00000468653 CRYBG2Q8N1P7 616 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 DNAJC5GQ8N7S2 189 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 DBF4BQ8NFT6 615 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 SEPT8Q92599 483 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 TNIP3Q96KP6 325 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 CPXM1Q96SM3 734 aa20.08■□□□□ 0.8
SMC4-209ENST00000468653 HCRTO43612 131 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 IGFBP6P24592 240 aaPredicted RBP20.07■□□□□ 0.8
SMC4-209ENST00000468653 RNASE9P60153 205 aaKnown RBP20.07■□□□□ 0.8
SMC4-209ENST00000468653 TAP1Q03518 808 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 C2orf54Q08AI8 447 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 PLEKHG4Q58EX7 1191 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 DCUN1D2Q6PH85 259 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 GPR161Q8N6U8 529 aaKnown RBP20.07■□□□□ 0.8
SMC4-209ENST00000468653 NOA1Q8NC60 698 aaKnown RBP20.07■□□□□ 0.8
SMC4-209ENST00000468653 UROC1Q96N76 676 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 PAAF1Q9BRP4 392 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 HIPK3Q9H422 1215 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 WDR35Q9P2L0 1181 aa20.07■□□□□ 0.8
SMC4-209ENST00000468653 INPPL1O15357 1258 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 B3GAT3O94766 335 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 GJB6O95452 261 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 SLC1A1P43005 524 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 MNX1P50219 401 aaPredicted RBP20.06■□□□□ 0.8
SMC4-209ENST00000468653 PSMC1P62191 440 aaKnown RBP20.06■□□□□ 0.8
SMC4-209ENST00000468653 ITIH3Q06033 890 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 PDCLQ13371 301 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 GPNMBQ14956 572 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 ARHGAP17Q68EM7 881 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 OSTM1Q86WC4 334 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 C3orf20Q8ND61 904 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 C3orf58Q8NDZ4 430 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 SPATA4Q8NEY3 305 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 URGCPQ8TCY9 931 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 IPO4Q8TEX9 1081 aaKnown RBP20.06■□□□□ 0.8
SMC4-209ENST00000468653 ST7Q9NRC1 585 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 TCRBV5S1A1TA0A578 114 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 GOLGA8SH3BPF8 625 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 PROSCO94903 275 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 ERBB2P04626 1255 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 HSPA8P11142 646 aaKnown RBP20.06■□□□□ 0.8
SMC4-209ENST00000468653 TLE2Q04725 743 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 TRIM60Q495X7 471 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 CPNE8Q86YQ8 564 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 TMEM86AQ8N2M4 240 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 ACTRT1Q8TDG2 376 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 CD101Q93033 1021 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 MCEEQ96PE7 176 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 LPIN3Q9BQK8 851 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 MIS12Q9H081 205 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 CARD9Q9H257 536 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 TJP2Q9UDY2 1190 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 IP6K2Q9UHH9 426 aa20.06■□□□□ 0.8
SMC4-209ENST00000468653 CCDC66A2RUB6 948 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 TMEM191CA6NGB0 347 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 PGRMC1O00264 195 aaKnown RBP20.05■□□□□ 0.8
SMC4-209ENST00000468653 ENPP3O14638 875 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 PFKMP08237 780 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 CTNNA2P26232 953 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 RPL7AP62424 266 aaKnown RBP20.05■□□□□ 0.8
SMC4-209ENST00000468653 ZNF268Q14587 947 aaPredicted RBP20.05■□□□□ 0.8
SMC4-209ENST00000468653 NOMO2Q5JPE7 1267 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 CLLU1OSQ5K130 101 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 FAM43BQ6ZT52 329 aaPredicted RBP20.05■□□□□ 0.8
SMC4-209ENST00000468653 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.05■□□□□ 0.8
SMC4-209ENST00000468653 ANKRD7Q92527 254 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 ALG3Q92685 438 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 KRT35Q92764 455 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 APBB2Q92870 758 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 EPC1Q9H2F5 836 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 TMEM161AQ9NX61 479 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 LCMT1Q9UIC8 334 aa20.05■□□□□ 0.8
SMC4-209ENST00000468653 GABRDO14764 452 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 RHOXF2BP0C7M4 288 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 SETSIPP0DME0 302 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 COL6A1P12109 1028 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 CCDC130P13994 396 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 ADORA2BP29275 332 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 CTNNA1P35221 906 aaKnown RBP20.04■□□□□ 0.8
SMC4-209ENST00000468653 GABRB2P47870 512 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 LHX1P48742 406 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 CCL23P55773 120 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 FAAP100Q0VG06 881 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 PKN2Q16513 984 aaKnown RBP20.04■□□□□ 0.8
SMC4-209ENST00000468653 PKDCCQ504Y2 493 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 TIGD5Q53EQ6 642 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 TTC30AQ86WT1 665 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 XYLT1Q86Y38 959 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 RASGEF1CQ8N431 466 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 B3GALNT2Q8NCR0 500 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 SCLYQ96I15 445 aa20.04■□□□□ 0.8
SMC4-209ENST00000468653 TOX2Q96NM4 488 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms