RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 KBTBD7Q8WVZ9 684 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 MMS19Q96T76 1030 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 LPIN3Q9BQK8 851 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 PI4K2AQ9BTU6 479 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 ATXN3LQ9H3M9 355 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 CDH9Q9ULB4 789 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 MYBPHLA2RUH7 354 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 LRRIQ3A6PVS8 624 aaPredicted RBP19.44■□□□□ 0.7
CGREF1-208ENST00000467539 MAPK13O15264 365 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 GABRR2P28476 465 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 WEE1P30291 646 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 GNL1P36915 607 aaPredicted RBP19.44■□□□□ 0.7
CGREF1-208ENST00000467539 CASP4P49662 377 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 MYL6P60660 151 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 RPL10AP62906 217 aaKnown RBP19.44■□□□□ 0.7
CGREF1-208ENST00000467539 PRKCQQ04759 706 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 TAF12Q16514 161 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 WDR72Q3MJ13 1102 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 MFSD6LQ8IWD5 586 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 TMC2Q8TDI7 906 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 FUBP3Q96I24 572 aaKnown RBP eCLIP19.44■□□□□ 0.7
CGREF1-208ENST00000467539 TRMT61BQ9BVS5 477 aaKnown RBP19.44■□□□□ 0.7
CGREF1-208ENST00000467539 XYLT2Q9H1B5 865 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 VRTNQ9H8Y1 702 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 TBC1D17Q9HA65 648 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 IL21Q9HBE4 155 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 FRMD4BQ9Y2L6 1034 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 TSC2P49815 1807 aa19.44■□□□□ 0.7
CGREF1-208ENST00000467539 IKBKBO14920 756 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 PHACTR2O75167 634 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 PDGFRBP09619 1106 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 HMGA1P17096 107 aaKnown RBP19.43■□□□□ 0.7
CGREF1-208ENST00000467539 PSMC3P17980 439 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 CYP2F1P24903 491 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 VIPR2P41587 438 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 CFAP221Q4G0U5 840 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 ARHGAP15Q53QZ3 475 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 SPATA2LQ8IUW3 424 aaPredicted RBP19.43■□□□□ 0.7
CGREF1-208ENST00000467539 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
CGREF1-208ENST00000467539 MKNK1Q9BUB5 465 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 DDX23Q9BUQ8 820 aaKnown RBP19.43■□□□□ 0.7
CGREF1-208ENST00000467539 SLITRK6Q9H5Y7 841 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 MAPK8IP1Q9UQF2 711 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 SIT1Q9Y3P8 196 aa19.43■□□□□ 0.7
CGREF1-208ENST00000467539 HCRTO43612 131 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 ATP2C2O75185 946 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 F11P03951 625 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 CSH1P0DML2 217 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 CSH2P0DML3 217 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 CDC25CP30307 473 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 MAPRE1Q15691 268 aaKnown RBP19.42■□□□□ 0.7
CGREF1-208ENST00000467539 DDR2Q16832 855 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 TDRD10Q5VZ19 366 aaKnown RBP19.42■□□□□ 0.7
CGREF1-208ENST00000467539 VITQ6UXI7 678 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 C4orf50Q6ZRC1 276 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 ARID3BQ8IVW6 561 aaPredicted RBP19.42■□□□□ 0.7
CGREF1-208ENST00000467539 DEPDC1BQ8WUY9 529 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 TIGD1Q96MW7 591 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 SYT15Q9BQS2 421 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 MRPL45Q9BRJ2 306 aaKnown RBP19.42■□□□□ 0.7
CGREF1-208ENST00000467539 SNX25Q9H3E2 840 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 TASP1Q9H6P5 420 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 TRPV5Q9NQA5 729 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 MAGEC2Q9UBF1 373 aaPredicted RBP19.42■□□□□ 0.7
CGREF1-208ENST00000467539 ZMYM5Q9UJ78 669 aa19.42■□□□□ 0.7
CGREF1-208ENST00000467539 KMT2EQ8IZD2 1858 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 KANSL1LA0AUZ9 987 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 SOBPA7XYQ1 873 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 HEPACAM2A8MVW5 462 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 RFX1P22670 979 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 RPL13P26373 211 aaKnown RBP19.41■□□□□ 0.7
CGREF1-208ENST00000467539 HOXD11P31277 338 aaPredicted RBP19.41■□□□□ 0.7
CGREF1-208ENST00000467539 MAGEA11P43364 429 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 MCCD1P59942 119 aaPredicted RBP19.41■□□□□ 0.7
CGREF1-208ENST00000467539 TNNC1P63316 161 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 DLG4P78352 724 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 FAM160A1Q05DH4 1040 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 PNOCQ13519 176 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 MLF2Q15773 248 aaPredicted RBP19.41■□□□□ 0.7
CGREF1-208ENST00000467539 GPR158Q5T848 1215 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 CEP135Q66GS9 1140 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 CCDC105Q8IYK2 499 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 DTWD2Q8NBA8 298 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 SPATA20Q8TB22 786 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 DNASE1L2Q92874 299 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 IRF7Q92985 503 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 GSDMAQ96QA5 445 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 NELL2Q99435 816 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 BRD9Q9H8M2 597 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 CRTAC1Q9NQ79 661 aa19.41■□□□□ 0.7
CGREF1-208ENST00000467539 VNN1O95497 513 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 NR2F2P24468 414 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 GPR15P49685 360 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 ENPEPQ07075 957 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 ADAM9Q13443 819 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 BIRC3Q13489 604 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 NCOA4Q13772 614 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 GRM2Q14416 872 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 SGSM1Q2NKQ1 1148 aa19.4■□□□□ 0.7
CGREF1-208ENST00000467539 ZACNQ401N2 412 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms