RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PTGISQ16647 500 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 ZNF394Q53GI3 561 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 SGO2Q562F6 1265 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 DCAF12L1Q5VU92 463 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 TWF2Q6IBS0 349 aaKnown RBP10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 LCLAT1Q6UWP7 414 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 DPH6Q7L8W6 267 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 MRPL10Q7Z7H8 261 aaKnown RBP10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 ERICH1Q86X53 443 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 SLC43A3Q8NBI5 491 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 C1orf131Q8NDD1 294 aaKnown RBP10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 FEZF2Q8TBJ5 459 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 ALG3Q92685 438 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 TWNKQ96RR1 684 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 NT5C1AQ9BXI3 368 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 DNAI2Q9GZS0 605 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 SLITRK6Q9H5Y7 841 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 SLC38A7Q9NVC3 462 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 ZNF446Q9NWS9 450 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 SMARCAL1Q9NZC9 954 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 TUBGCP4Q9UGJ1 667 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 PARP2Q9UGN5 583 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 CHORDC1Q9UHD1 332 aaPredicted RBP10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 IP6K2Q9UHH9 426 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 ANAPC7Q9UJX3 599 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 GIT1Q9Y2X7 761 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 TMEM191CA6NGB0 347 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 PSTPIP1O43586 416 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 RRP9O43818 475 aaKnown RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 MICAL2O94851 1124 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 SETSIPP0DME0 302 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 PAX3P23760 479 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 GABRB2P47870 512 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 TAF6P49848 677 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 NDST1P52848 882 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 ACLYP53396 1101 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 RWDD2BP57060 319 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 DSC3Q14574 896 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 ZNF268Q14587 947 aaPredicted RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 MAP9Q49MG5 647 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 FBXO47Q5MNV8 452 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 LRRC38Q5VT99 294 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 ARHGAP17Q68EM7 881 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 C8orf74Q6P047 294 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 DENND1BQ6P3S1 775 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 BLOC1S3Q6QNY0 202 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 CCNI2Q6ZMN8 369 aaPredicted RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 NIPA2Q8N8Q9 360 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 EIF1ADQ8N9N8 165 aaKnown RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 C3orf20Q8ND61 904 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 FNIP1Q8TF40 1166 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 KRT35Q92764 455 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 C18orf25Q96B23 403 aaPredicted RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 RNPC3Q96LT9 517 aaKnown RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 PPP1R10Q96QC0 940 aaKnown RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 PLVAPQ9BX97 442 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 MIS12Q9H081 205 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 CXCL16Q9H2A7 254 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 FAM105AQ9NUU6 356 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 STIM2Q9P246 746 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 SNX9Q9Y5X1 595 aa10.1□□□□□ -0.79
APOBEC1-202ENST00000467171 EVPLQ92817 2033 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 CASP8AP2Q9UKL3 1982 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 TMEM110-MUSTN1A8MSY1 372 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 KPNA7A9QM74 516 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 KRIT1O00522 736 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 PTGESO14684 152 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 PPEF2O14830 753 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 FGGP02679 453 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 INHAP05111 366 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 SKIP12755 728 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 ITGA4P13612 1032 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 THPOP40225 353 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 GPD2P43304 727 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 LONRF2Q1L5Z9 754 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 SV2CQ496J9 727 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 PTPN20Q4JDL3 420 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 GLRA4Q5JXX5 417 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 DNAJC24Q6P3W2 148 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 IFT20Q8IY31 132 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 CRYBG2Q8N1P7 616 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 TOP6BLQ8N6T0 577 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 ARRDC4Q8NCT1 418 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 STK32AQ8WU08 396 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 HEXIM2Q96MH2 286 aaKnown RBP10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 GLT1D1Q96MS3 346 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 RUNDC3BQ96NL0 473 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 MRPL45Q9BRJ2 306 aaKnown RBP10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 APOL6Q9BWW8 343 aa10.09□□□□□ -0.79
APOBEC1-202ENST00000467171 AGO3Q9H9G7 860 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms