RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PRUNE1Q86TP1 453 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 ARRDC4Q8NCT1 418 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 PPP1R14AQ96A00 147 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 GLT1D1Q96MS3 346 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 BPIFA3Q9BQP9 254 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 FMN2Q9NZ56 1722 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 ADCY3O60266 1144 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 GPD1P21695 349 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 S100A5P33763 92 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 GGCXP38435 758 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 SERPINB4P48594 390 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 NLRP11P59045 1033 aaKnown RBP9.08□□□□□ -0.96
HPS4-209ENST00000466781 PRKCEQ02156 737 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 EFHC1Q5JVL4 640 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 ANKRD49Q8WVL7 239 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.08□□□□□ -0.96
HPS4-209ENST00000466781 ATG4CQ96DT6 458 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 MAGEB10Q96LZ2 347 aaPredicted RBP9.08□□□□□ -0.96
HPS4-209ENST00000466781 DDX28Q9NUL7 540 aaKnown RBP9.08□□□□□ -0.96
HPS4-209ENST00000466781 WWOXQ9NZC7 414 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.08□□□□□ -0.96
HPS4-209ENST00000466781 DCDC2CA8MYV0 355 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 VWA5AO00534 786 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 DAB1O75553 588 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 FAM200BP0CF97 657 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 MBL2P11226 248 aaPredicted RBP9.08□□□□□ -0.96
HPS4-209ENST00000466781 IL1R1P14778 569 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 RASA1P20936 1047 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 THPOP40225 353 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 TMEM169Q96HH4 297 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 SCUBE2Q9NQ36 999 aa9.08□□□□□ -0.96
HPS4-209ENST00000466781 ZC3H7BQ9UGR2 993 aaKnown RBP9.08□□□□□ -0.96
HPS4-209ENST00000466781 DISP2A7MBM2 1401 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 GMNCA6NCL1 334 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 GOLGA8RI6L899 631 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 SLC26A4O43511 780 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 HBP1O60381 514 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 PGK2P07205 417 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 SLC16A1P53985 500 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 KCNK10P57789 538 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 SEMA3FQ13275 785 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 LAMC2Q13753 1193 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 TTLL9Q3SXZ7 439 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 PCYOX1LQ8NBM8 494 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 MROH8Q9H579 483 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 ALG13Q9NP73 1137 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 RAB6BQ9NRW1 208 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 FAM49BQ9NUQ9 324 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 PRMT7Q9NVM4 692 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 USE1Q9NZ43 259 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 APEX2Q9UBZ4 518 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 VGLL3A8MV65 326 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 HOXA2O43364 376 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 NCAM1P13591 858 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 DCAF6Q58WW2 860 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 GNASQ5JWF2 1037 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 NBPF12Q5TAG4 269 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 TRIM69Q86WT6 500 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 DDX42Q86XP3 938 aaKnown RBP eCLIP9.07□□□□□ -0.96
HPS4-209ENST00000466781 RIN2Q8WYP3 895 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 TRABDQ9H4I3 376 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 F8W810 466 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 MYO1CO00159 1063 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 GPR182O15218 404 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 WBP4O75554 376 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 ASS1P00966 412 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 CHI3L1P36222 383 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 NPEPPSP55786 919 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 CYGBQ8WWM9 190 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 JADE3Q92613 823 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 GID8Q9NWU2 228 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 AK9Q5TCS8 1911 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 EVPLLA8MZ36 301 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 SYNCRIPO60506 623 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 DEAF1O75398 565 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 FYNP06241 537 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 PBLDP30039 288 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 TAF6P49848 677 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 CSE1LP55060 971 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 BACE1P56817 501 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 PAN2Q504Q3 1202 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 C16orf62Q7Z3J2 963 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 SLC30A5Q8TAD4 765 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 YME1L1Q96TA2 773 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 EMILIN2Q9BXX0 1053 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 SENP2Q9HC62 589 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 PCMTD2Q9NV79 361 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 F5H5T6 163 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 POLBP06746 335 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 SPRP35270 261 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 RFX3P48380 749 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 POU4F1Q01851 419 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 CAMK2GQ13555 558 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 PLCL1Q15111 1095 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 TRIP4Q15650 581 aaPredicted RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 SNRNP35Q16560 246 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 GAS2L3Q86XJ1 694 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms