RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 EBF3Q9H4W6 596 aa17.53■□□□□ 0.4
BRD9-201ENST00000466684 HPS4Q9NQG7 708 aa17.53■□□□□ 0.4
BRD9-201ENST00000466684 KMT2BQ9UMN6 2715 aaPredicted RBP17.52■□□□□ 0.4
BRD9-201ENST00000466684 AXIN1O15169 862 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 AKAP3O75969 853 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 KRT37O76014 449 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 CCDC192P0DO97 292 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 HMGA1P17096 107 aaKnown RBP17.52■□□□□ 0.4
BRD9-201ENST00000466684 DDIT3P35638 169 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 FSTL4Q6MZW2 842 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 ZNF720Q7Z2F6 126 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 EFCAB13Q8IY85 973 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 CAMKK1Q8N5S9 505 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 ARRDC1-AS1Q9H2J1 176 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 UXTQ9UBK9 157 aaPredicted RBP17.52■□□□□ 0.4
BRD9-201ENST00000466684 CCL26Q9Y258 94 aa17.52■□□□□ 0.4
BRD9-201ENST00000466684 DENND4CQ5VZ89 1909 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 PRPF40AO75400 957 aaKnown RBP17.51■□□□□ 0.39
BRD9-201ENST00000466684 EPN2O95208 641 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 HOXC13P31276 330 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 RAP1GAPP47736 663 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 RPL10AP62906 217 aaKnown RBP17.51■□□□□ 0.39
BRD9-201ENST00000466684 ZNF268Q14587 947 aaPredicted RBP17.51■□□□□ 0.39
BRD9-201ENST00000466684 PDGFRLQ15198 375 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
BRD9-201ENST00000466684 TXNDC8Q6A555 127 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 TRIM68Q6AZZ1 485 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 PKN3Q6P5Z2 889 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 CRELD2Q6UXH1 353 aaPredicted RBP17.51■□□□□ 0.39
BRD9-201ENST00000466684 BRAPQ7Z569 592 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 MON1AQ86VX9 555 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 LEO1Q8WVC0 666 aaPredicted RBP17.51■□□□□ 0.39
BRD9-201ENST00000466684 PI4K2AQ9BTU6 479 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 ABCB6Q9NP58 842 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 MAGED2Q9UNF1 606 aaPredicted RBP17.51■□□□□ 0.39
BRD9-201ENST00000466684 EXOC7Q9UPT5 735 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 GREB1Q4ZG55 1949 aa17.51■□□□□ 0.39
BRD9-201ENST00000466684 OTOL1A6NHN0 477 aaPredicted RBP17.5■□□□□ 0.39
BRD9-201ENST00000466684 DRD1P21728 446 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 KCNA4P22459 653 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 PXNP49023 591 aaPredicted RBP17.5■□□□□ 0.39
BRD9-201ENST00000466684 GRIN1Q05586 938 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 ST3GAL2Q16842 350 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 C8orf34Q49A92 452 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 FBXO43Q4G163 708 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 KBTBD6Q86V97 674 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 SFR1Q86XK3 245 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 CHAMP1Q96JM3 812 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 ACBD6Q9BR61 282 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 TMLHEQ9NVH6 421 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 SEL1LQ9UBV2 794 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 PCDHGA5Q9Y5G8 931 aa17.5■□□□□ 0.39
BRD9-201ENST00000466684 ZNF638Q14966 1978 aaKnown RBP17.5■□□□□ 0.39
BRD9-201ENST00000466684 HUS1O60921 280 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 RNF40O75150 1001 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 EGFP01133 1207 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 ARSAP15289 507 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 ADSSP30520 456 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 TFAMQ00059 246 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 MYL7Q01449 175 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 SF3A2Q15428 464 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 TMEM86AQ8N2M4 240 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 PDCL2Q8N4E4 241 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 CPA6Q8N4T0 437 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 CACTINQ8WUQ7 758 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 CHFRQ96EP1 664 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 TRMT2BQ96GJ1 504 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 ZC3H10Q96K80 434 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 P2RY13Q9BPV8 354 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 DDX43Q9NXZ2 648 aaKnown RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 STK17AQ9UEE5 414 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 AGAP1Q9UPQ3 857 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.49■□□□□ 0.39
BRD9-201ENST00000466684 OBSL1O75147 1896 aa17.49■□□□□ 0.39
BRD9-201ENST00000466684 TULP1O00294 542 aaPredicted RBP17.48■□□□□ 0.39
BRD9-201ENST00000466684 PPP1R37O75864 691 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 NOL4O94818 638 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
BRD9-201ENST00000466684 ITGB3P05106 788 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 POLR2BP30876 1174 aaKnown RBP17.48■□□□□ 0.39
BRD9-201ENST00000466684 GPR15P49685 360 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 GALK1P51570 392 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 FAM160A1Q05DH4 1040 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 MTF1Q14872 753 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 SPATA18Q8TC71 538 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 MYRFLQ96LU7 910 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 ACCSQ96QU6 501 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 FAM213AQ9BRX8 229 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 IKZF4Q9H2S9 585 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 SPAG17Q6Q759 2223 aa17.48■□□□□ 0.39
BRD9-201ENST00000466684 USP17L7P0C7H9 530 aa17.47■□□□□ 0.39
BRD9-201ENST00000466684 GAP43P17677 238 aa17.47■□□□□ 0.39
BRD9-201ENST00000466684 GJA4P35212 333 aa17.47■□□□□ 0.39
BRD9-201ENST00000466684 CCDC6Q16204 474 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms