RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 VDRP11473 427 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 KRT5P13647 590 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 TNFAIP3P21580 790 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 WARSP23381 471 aaKnown RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 ASPAP45381 313 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 ALDH7A1P49419 539 aaKnown RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 KLK7P49862 253 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 SCNN1GP51170 649 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CCZ1BP86790 482 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CCZ1P86791 482 aaPredicted RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CDR2Q01850 454 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CREMQ03060 361 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 KIF5AQ12840 1032 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 LRMPQ12912 555 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 GPNMBQ14956 572 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 NAB2Q15742 525 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 ARHGAP44Q17R89 818 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 HGSNATQ68CP4 663 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 LMBRD2Q68DH5 695 aaPredicted RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 WDR59Q6PJI9 974 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 TMEM270Q6UE05 265 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 DSTYKQ6XUX3 929 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 LIMS2Q7Z4I7 341 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 DEFB128Q7Z7B8 93 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 ARHGEF19Q8IW93 802 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CRYBG2Q8N1P7 616 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 THEM5Q8N1Q8 247 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 RNF10Q8N5U6 811 aaKnown RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 KIAA1524Q8TCG1 905 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 TRIM43Q96BQ3 446 aaPredicted RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 TMEM176AQ96HP8 235 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 SCLYQ96I15 445 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 SUSD3Q96L08 255 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 ZMAT2Q96NC0 199 aaKnown RBP6.4□□□□□ -1.38
CHMP3-206ENST00000466032 AGPAT1Q99943 283 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 LHX5Q9H2C1 402 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 SNX25Q9H3E2 840 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CYLDQ9NQC7 956 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CISHQ9NSE2 258 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 PCDHGC3Q9UN70 934 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 FAN1Q9Y2M0 1017 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 PCDHB4Q9Y5E5 795 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 SNX9Q9Y5X1 595 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 PTPRJQ12913 1337 aa6.4□□□□□ -1.39
CHMP3-206ENST00000466032 TTC3P53804 2025 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 A0A0A6YYK5 440 aaPredicted RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 BTNL10A8MVZ5 291 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 H7C4K7 107 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CYB561D2O14569 222 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 GABRDO14764 452 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 EPHB6O15197 1021 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 MEFVO15553 781 aaPredicted RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 RTN2O75298 545 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 TADA2AO75478 443 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 C1RP00736 705 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 SETSIPP0DME0 302 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CSF2RAP15509 400 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CYP11B1P15538 503 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 DESP17661 470 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 LAG3P18627 525 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ACO1P21399 889 aaKnown RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 GNA15P30679 374 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 GNL1P36915 607 aaPredicted RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 EIF4A3P38919 411 aaKnown RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 USP8P40818 1118 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 KIF11P52732 1056 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF132P52740 706 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CNGA2Q16280 664 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ASTE1Q2TB18 679 aaPredicted RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ARHGAP29Q52LW3 1261 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 SGO2Q562F6 1265 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 GLRA4Q5JXX5 417 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ALKBH5Q6P6C2 394 aaKnown RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ALYREFQ86V81 257 aaKnown RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 TMEM139Q8IV31 216 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 RHOT2Q8IXI1 618 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 COLGALT2Q8IYK4 626 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 UBR7Q8N806 425 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 RBBP8NLQ8NC74 664 aaPredicted RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 TMEM35BQ8NCS4 154 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 EPS8L1Q8TE68 723 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 STK32AQ8WU08 396 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 LINC01599Q8WXQ3 324 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 HERVK_113Q902F9 699 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF689Q96CS4 500 aaPredicted RBP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ABHD8Q96I13 439 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 SENP8Q96LD8 212 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CEP295NLQ96MC4 621 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 KREMEN1Q96MU8 473 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 SAMD11Q96NU1 681 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CASD1Q96PB1 797 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 NCAPGQ9BPX3 1015 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ACBD6Q9BR61 282 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 PI4K2AQ9BTU6 479 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 GPR88Q9GZN0 384 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 APOBEC3GQ9HC16 384 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms