RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 TRIM9Q9C026 710 aa16.6■□□□□ 0.25
HOXB3-204ENST00000465120 IL21Q9HBE4 155 aa16.6■□□□□ 0.25
HOXB3-204ENST00000465120 OBP2AQ9NY56 170 aa16.6■□□□□ 0.25
HOXB3-204ENST00000465120 GTSE1Q9NYZ3 720 aa16.6■□□□□ 0.25
HOXB3-204ENST00000465120 GTF3C4Q9UKN8 822 aa16.6■□□□□ 0.25
HOXB3-204ENST00000465120 EP300Q09472 2414 aaPredicted RBP16.6■□□□□ 0.25
HOXB3-204ENST00000465120 F5P12259 2224 aa16.6■□□□□ 0.25
HOXB3-204ENST00000465120 FANCMQ8IYD8 2048 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 SPECC1L-ADORA2AF8WAN1 911 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 ARNTLO00327 626 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 YEATS4O95619 227 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 CSH1P0DML2 217 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 CSH2P0DML3 217 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 CYP2F1P24903 491 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 LHX1P48742 406 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 CCR3P51677 355 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 MLLT6P55198 1093 aaPredicted RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 RPL10AP62906 217 aaKnown RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 DDR2Q16832 855 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 CBWD2Q8IUF1 395 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 SPATA2LQ8IUW3 424 aaPredicted RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 SCN4BQ8IWT1 228 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 ADGRF2Q8IZF7 708 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 CMTM8Q8IZV2 173 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 ZNF687Q8N1G0 1237 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 SUMF1Q8NBK3 374 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 ZBTB44Q8NCP5 570 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 STKLD1Q8NE28 680 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 MRPS31Q92665 395 aaKnown RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 IER2Q9BTL4 223 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 FAM126AQ9BYI3 521 aaPredicted RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 PRMT8Q9NR22 394 aaPredicted RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 RBM12Q9NTZ6 932 aaKnown RBP16.59■□□□□ 0.25
HOXB3-204ENST00000465120 INTS13Q9NVM9 706 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 KBTBD4Q9NVX7 518 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 HSPBP1Q9NZL4 362 aa16.59■□□□□ 0.25
HOXB3-204ENST00000465120 GVINP1Q7Z2Y8 2422 aa16.58■□□□□ 0.25
HOXB3-204ENST00000465120 CHRNB1P11230 501 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 PCSK1P29120 753 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 CXCL12P48061 93 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 ME1P48163 572 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 NLRP12P59046 1061 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 TNK2Q07912 1038 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 E2F4Q16254 413 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 DUOXA2Q1HG44 320 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 FAM26FQ5R3K3 315 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 SHC4Q6S5L8 630 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 OSTM1Q86WC4 334 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 RALGPS2Q86X27 583 aaPredicted RBP16.58■□□□□ 0.24
HOXB3-204ENST00000465120 TOP6BLQ8N6T0 577 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 OR5B17Q8NGF7 314 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 HPDLQ96IR7 371 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 MMS19Q96T76 1030 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 KIAA1586Q9HCI6 787 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 GKN1Q9NS71 199 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 GDAP2Q9NXN4 497 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 FAM13BQ9NYF5 915 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 SIX4Q9UIU6 781 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 ZMYM5Q9UJ78 669 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 RAB23Q9ULC3 237 aa16.58■□□□□ 0.24
HOXB3-204ENST00000465120 NUP210Q8TEM1 1887 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 COL4A2P08572 1712 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 MYBPHLA2RUH7 354 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 CLIC2O15247 247 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 EIF3DO15371 548 aaKnown RBP eCLIP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 POLR2DO15514 142 aaKnown RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 F11P03951 625 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 HMGA1P17096 107 aaKnown RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 TNNI1P19237 187 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 DDX6P26196 483 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■■□□ 19.1
HOXB3-204ENST00000465120 WEE1P30291 646 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 CTHP32929 405 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 CYP2J2P51589 502 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 FOXK2Q01167 660 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 PON2Q15165 354 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 ITPRIPL2Q3MIP1 535 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 TXNDC8Q6A555 127 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 NELFCDQ8IXH7 590 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 SNX21Q969T3 373 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 TRPC7Q9HCX4 862 aa16.57■□□□□ 0.24
HOXB3-204ENST00000465120 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 SMG5Q9UPR3 1016 aaKnown RBP16.57■□□□□ 0.24
HOXB3-204ENST00000465120 PTPRJQ12913 1337 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 FRYLO94915 3013 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 HCRTO43612 131 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
HOXB3-204ENST00000465120 AFMP43652 599 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 SATB1Q01826 763 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 SOWAHAQ2M3V2 549 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 DGKKQ5KSL6 1271 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms