RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PSMC1P62191 440 aaKnown RBP18.91■□□□□ 0.62
VPS52-214ENST00000463486 NFE2Q16621 373 aaPredicted RBP18.91■□□□□ 0.62
VPS52-214ENST00000463486 PRSS36Q5K4E3 855 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 OTOP3Q7RTS5 596 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 HS6ST3Q8IZP7 471 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 FBXL13Q8NEE6 735 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 DPEP3Q9H4B8 488 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 ABCB6Q9NP58 842 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.623e-13■■■■■ 167.7
VPS52-214ENST00000463486 EPS15L1Q9UBC2 864 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 PCDHB5Q9Y5E4 795 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 FSHRP23945 695 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 CYP2F1P24903 491 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 ERCC5P28715 1186 aaPredicted RBP18.9■□□□□ 0.62
VPS52-214ENST00000463486 TUFMP49411 452 aaKnown RBP18.9■□□□□ 0.62
VPS52-214ENST00000463486 NOP14P78316 857 aaKnown RBP18.9■□□□□ 0.62
VPS52-214ENST00000463486 CFAP221Q4G0U5 840 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 PABPC1LQ4VXU2 614 aaKnown RBP18.9■□□□□ 0.62
VPS52-214ENST00000463486 DCAF17Q5H9S7 520 aaPredicted RBP18.9■□□□□ 0.62
VPS52-214ENST00000463486 TCERG1LQ5VWI1 586 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 SCARA5Q6ZMJ2 495 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 TMC8Q8IU68 726 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 TDRD5Q8NAT2 981 aaKnown RBP18.9■□□□□ 0.62
VPS52-214ENST00000463486 OR6B3Q8NGW1 331 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 MYCBPAPQ8TBZ2 947 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 TCEAL4Q96EI5 215 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 CORO1BQ9BR76 489 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 SNX25Q9H3E2 840 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 RAB20Q9NX57 234 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 ABI2Q9NYB9 513 aaPredicted RBP18.9■□□□□ 0.62
VPS52-214ENST00000463486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.9■□□□□ 0.62
VPS52-214ENST00000463486 TMEM63CQ9P1W3 806 aa18.9■□□□□ 0.62
VPS52-214ENST00000463486 MYO10Q9HD67 2058 aa18.89■□□□□ 0.62
VPS52-214ENST00000463486 PI4K2BG5E9Z4 385 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 GNA14O95837 355 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 LAMP2P13473 410 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
VPS52-214ENST00000463486 FMO5P49326 533 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 INCA1Q0VD86 236 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 DNAJB7Q7Z6W7 309 aaPredicted RBP18.89■□□□□ 0.61
VPS52-214ENST00000463486 LMO3Q8TAP4 145 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 WHAMMQ8TF30 809 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 FGF13Q92913 245 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 TATDN2Q93075 761 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 PSMG2Q969U7 264 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 FUBP3Q96I24 572 aaKnown RBP eCLIP18.89■□□□□ 0.61
VPS52-214ENST00000463486 LIMD1Q9UGP4 676 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 HMGXB4Q9UGU5 601 aa18.89■□□□□ 0.61
VPS52-214ENST00000463486 A8MXQ7 604 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 MICAL2O94851 1124 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 ALDH1A3P47895 512 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 GPR15P49685 360 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 EPHB3P54753 998 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 PLD1Q13393 1074 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 MGAT5BQ3V5L5 792 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
VPS52-214ENST00000463486 PAQR9Q6ZVX9 377 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 GET4Q7L5D6 327 aaPredicted RBP18.88■□□□□ 0.61
VPS52-214ENST00000463486 NPAS3Q8IXF0 933 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 CRYBG2Q8N1P7 616 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 PLCD3Q8N3E9 789 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 MYLPFQ96A32 169 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 ACSF2Q96CM8 615 aaPredicted RBP18.88■□□□□ 0.61
VPS52-214ENST00000463486 PCED1BQ96HM7 432 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 FAXDC2Q96IV6 333 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 ZNF512Q96ME7 567 aaPredicted RBP18.88■□□□□ 0.61
VPS52-214ENST00000463486 TWNKQ96RR1 684 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 SEPT5Q99719 369 aaPredicted RBP18.88■□□□□ 0.61
VPS52-214ENST00000463486 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 EPHX3Q9H6B9 360 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 CYP3A43Q9HB55 503 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 ZNF334Q9HCZ1 680 aaPredicted RBP18.88■□□□□ 0.61
VPS52-214ENST00000463486 TMEM30AQ9NV96 361 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 MUTYHQ9UIF7 546 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 CDH7Q9ULB5 785 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 ASB3Q9Y575 518 aa18.88■□□□□ 0.61
VPS52-214ENST00000463486 ANHXE9PGG2 379 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 P4HA1P13674 534 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 HMGA1P17096 107 aaKnown RBP18.87■□□□□ 0.61
VPS52-214ENST00000463486 MAGEA11P43364 429 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 NDST1P52848 882 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 DDR2Q16832 855 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 MDH1BQ5I0G3 518 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 B3GALNT2Q8NCR0 500 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 GPR152Q8TDT2 470 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 B3GNT5Q9BYG0 378 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 IL21Q9HBE4 155 aa18.87■□□□□ 0.61
VPS52-214ENST00000463486 PTPRDP23468 1912 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 ASGR2P07307 311 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 CEBPBP17676 345 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 GBP2P32456 591 aaPredicted RBP18.86■□□□□ 0.61
VPS52-214ENST00000463486 CACNA2D1P54289 1103 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 KCNH2Q12809 1159 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 MAPRE1Q15691 268 aaKnown RBP18.86■□□□□ 0.61
VPS52-214ENST00000463486 CCDC183Q5T5S1 534 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 SDHAF4Q5VUM1 108 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 IQCEQ6IPM2 695 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 GAREM2Q75VX8 874 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 UNC93AQ86WB7 457 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms