RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 F5H423 210 aaPredicted RBP16.47■□□□□ 0.23
SMC4-204ENST00000462787 POLBP06746 335 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 CYP11B1P15538 503 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 GIT2Q14161 759 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 DNALI1O14645 258 aaPredicted RBP16.47■□□□□ 0.23
SMC4-204ENST00000462787 HNRNPRO43390 633 aaKnown RBP16.47■□□□□ 0.23
SMC4-204ENST00000462787 PDAP1Q13442 181 aaKnown RBP16.47■□□□□ 0.23
SMC4-204ENST00000462787 KRR1Q13601 381 aaKnown RBP16.47■□□□□ 0.23
SMC4-204ENST00000462787 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 FAM167AQ96KS9 214 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 RMDN3Q96TC7 470 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 Q4G0T1 1027 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 TFDP3Q5H9I0 405 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 LMBRD2Q68DH5 695 aaPredicted RBP16.47■□□□□ 0.23
SMC4-204ENST00000462787 DUPD1Q68J44 220 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 DEFB107AQ8IZN7 70 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
SMC4-204ENST00000462787 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 SPDYE16A6NNV3 312 aaPredicted RBP16.46■□□□□ 0.23
SMC4-204ENST00000462787 CHN2P52757 468 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 MYBPC2Q14324 1141 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 EFHC2Q5JST6 749 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 JMJD4Q9H9V9 463 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 PCDH9Q9HC56 1237 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 GABBR1Q9UBS5 961 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 ZNF335Q9H4Z2 1342 aaPredicted RBP16.46■□□□□ 0.23
SMC4-204ENST00000462787 HLA-DRAP01903 254 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 PYGMP11217 842 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 PDGFRAP16234 1089 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 USP10Q14694 798 aaKnown RBP16.46■□□□□ 0.23
SMC4-204ENST00000462787 LBRQ14739 615 aaKnown RBP16.46■□□□□ 0.23
SMC4-204ENST00000462787 NIM1KQ8IY84 436 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 APOPT1Q96IL0 206 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
SMC4-204ENST00000462787 PLEKHA7Q6IQ23 1121 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 C2orf40Q9H1Z8 148 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 KCNK4Q9NYG8 393 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 SLC12A6Q9UHW9 1150 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 APPL1Q9UKG1 709 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 KPNA4O00629 521 aaPredicted RBP16.46■□□□□ 0.23
SMC4-204ENST00000462787 ENTPD5O75356 428 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 PSMA4P25789 261 aaKnown RBP16.46■□□□□ 0.23
SMC4-204ENST00000462787 ZNF568Q3ZCX4 644 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 PDPK2PQ6A1A2 396 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 CCNJLQ8IV13 435 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 SLC25A41Q8N5S1 370 aa16.46■□□□□ 0.23
SMC4-204ENST00000462787 ATP9BO43861 1147 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 RAG1P15918 1043 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 NCOA4Q13772 614 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 RIN3Q8TB24 985 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 RMND5BQ96G75 393 aaPredicted RBP16.45■□□□□ 0.22
SMC4-204ENST00000462787 MTM1Q13496 603 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 SMAD1Q15797 465 aaKnown RBP16.45■□□□□ 0.22
SMC4-204ENST00000462787 BAP1Q92560 729 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 PAIP1Q9H074 479 aaKnown RBP16.45■□□□□ 0.22
SMC4-204ENST00000462787 SNX13Q9Y5W8 968 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 PSMD3O43242 534 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 SKA2Q8WVK7 121 aaPredicted RBP16.45■□□□□ 0.22
SMC4-204ENST00000462787 SCN3BQ9NY72 215 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 SORCS3Q9UPU3 1222 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 DNM1LO00429 736 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 USP1O94782 785 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 CAPRIN1Q14444 709 aaKnown RBP16.45■□□□□ 0.22
SMC4-204ENST00000462787 FAM98CQ17RN3 349 aaKnown RBP16.45■□□□□ 0.22
SMC4-204ENST00000462787 DNAAF5Q86Y56 855 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 RNF135Q8IUD6 432 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 RUSC1Q9BVN2 902 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 OSBPL7Q9BZF2 842 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 NRDE2Q9H7Z3 1164 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
SMC4-204ENST00000462787 ZBTB39O15060 712 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 ZC3H11AO75152 810 aaKnown RBP eCLIP16.44■□□□□ 0.228e-7■■■■■ 110
SMC4-204ENST00000462787 MED24O75448 989 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 RPL5P46777 297 aaKnown RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 PPM1FP49593 454 aaPredicted RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 EXOC3L1Q86VI1 746 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 ZCCHC9Q8N567 271 aaKnown RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 SLCO1B7G3V0H7 640 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 STILQ15468 1287 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 PDK4Q16654 411 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 EPC2Q52LR7 807 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 KYQ8NBH2 561 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 NLRP4Q96MN2 994 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 NDNQ99608 321 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 TMCO1Q9UM00 188 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 OCM2P0CE71 109 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 OCMP0CE72 109 aaPredicted RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 MUTP22033 750 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 SERPINB5P36952 375 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 BNIP1Q12981 228 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 SGSM1Q2NKQ1 1148 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 RWDD4Q6NW29 188 aaKnown RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 ZBTB49Q6ZSB9 765 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 HORMAD1Q86X24 394 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 SLC5A5Q92911 643 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms