RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 UMODL1Q5DID0 1318 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 PODXLO00592 558 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 TTI1O43156 1089 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZWINTO95229 277 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 BTG3Q14201 252 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 CNNM4Q6P4Q7 775 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 NCCRP1Q6ZVX7 275 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZC3H18Q86VM9 953 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCDC65Q8IXS2 484 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 HAUS1Q96CS2 278 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 LRRC37BQ96QE4 947 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 TUBGCP5Q96RT8 1024 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 SYNCQ9H7C4 482 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 MMRN2Q9H8L6 949 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ANGPTL2Q9UKU9 493 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 H3BRB1 525 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 LGR5O75473 907 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 GNA14O95837 355 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 IFNAR2P48551 515 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLC26A2P50443 739 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLC18A1P54219 525 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 TDRD12Q587J7 1177 aaKnown RBP12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 DTHD1Q6ZMT9 781 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 C3orf62Q6ZUJ4 267 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCNJLQ8IV13 435 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 METTL13Q8N6R0 699 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 C16orf70Q9BSU1 422 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 MYLK2Q9H1R3 596 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 MAPK8IP1Q9UQF2 711 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 TMEM98Q9Y2Y6 226 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 TELO2Q9Y4R8 837 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 STK24Q9Y6E0 443 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCDC162PA2VCL2 907 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 MYBL1P10243 752 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 VAV1P15498 845 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 PSEN2P49810 448 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 STAT5BP51692 787 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 AMPD3Q01432 767 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 MGAT5Q09328 741 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 CYLC2Q14093 348 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLC29A2Q14542 456 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 MFSD10Q14728 455 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 ARMCX6Q7L4S7 300 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 PLPPR4Q7Z2D5 763 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZNF302Q9NR11 478 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
TRAPPC3-205ENST00000462715 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 EIF4E1BA6NMX2 242 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 DKC1O60832 514 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 TECP42680 631 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 OXCT1P55809 520 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 SPIRE1Q08AE8 756 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 ITGA7Q13683 1181 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLC45A4Q5BKX6 768 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 SWSAP1Q6NVH7 229 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 DNAJC14Q6Y2X3 702 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 ERMNQ8TAM6 284 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 CORO1BQ9BR76 489 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 UTP6Q9NYH9 597 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 A0A0J9YVX5 310 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 TLDC2A0PJX2 215 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 TMEM120BA0PK00 339 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 F8W8V4 182 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 PSMG1O95456 288 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 HARSP12081 509 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 XIAPP98170 497 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 DR1Q01658 176 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 HNRNPDQ14103 355 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 EPHA7Q15375 998 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 NAALADL2Q58DX5 795 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 SPATA24Q86W54 205 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 CROCCP3Q8IVE0 287 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCDC60Q8IWA6 550 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 C7orf31Q8N865 590 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLC17A8Q8NDX2 589 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 CTNNBL1Q8WYA6 563 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 DGCR14Q96DF8 476 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 HES6Q96HZ4 224 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZDHHC7Q9NXF8 308 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 GABBR1Q9UBS5 961 aa12.09□□□□□ -0.47
TRAPPC3-205ENST00000462715 HAS3O00219 553 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 EPHB6O15197 1021 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 RIPK2O43353 540 aa12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 CYP1A1P04798 512 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC3-205ENST00000462715 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms