RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 NCLP19338 710 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 ABCD1P33897 745 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 HOXD13P35453 343 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 STAT6P42226 847 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 ME1P48163 572 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 RAB27AP51159 221 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 NDUFA8P51970 172 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 POU5F1Q01860 360 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 NAB2Q15742 525 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 BMT2Q1RMZ1 405 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 LONRF3Q496Y0 759 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 COBLL1Q53SF7 1204 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 CLLU1OSQ5K130 101 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 ZNF648Q5T619 568 aaPredicted RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 SLC39A4Q6P5W5 647 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 ALKAL1Q6UXT8 129 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 C22orf34Q6ZV56 151 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 ZNF720Q7Z2F6 126 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 TRMT1LQ7Z2T5 733 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 GPBP1Q86WP2 473 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 ECHDC2Q86YB7 292 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 SLC17A8Q8NDX2 589 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 HVCN1Q96D96 273 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 NLRP4Q96MN2 994 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 RAD9AQ99638 391 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 ACO2Q99798 780 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 ADAM2Q99965 735 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 TTYH1Q9H313 450 aaPredicted RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 PDZD7Q9H5P4 517 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 PARVGQ9HBI0 331 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 PRMT7Q9NVM4 692 aaPredicted RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 DACT1Q9NYF0 836 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 LARSQ9P2J5 1176 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 TNFSF13BQ9Y275 285 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 YBX2Q9Y2T7 364 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 MTCL1Q9Y4B5 1905 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 SCN1AP35498 2009 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 NPHP3-ACAD11A0A0J9YXS1 232 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 A0A1B0GVL5 298 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 XIRP2A4UGR9 3374 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 H0YCG3 227 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 EIF3DO15371 548 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS36-202ENST00000462289 B4GALT5O43286 388 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 LPXNO60711 386 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 CSDE1O75534 798 aaKnown RBP6.29□□□□□ -1.4
VPS36-202ENST00000462289 RHOBTB3O94955 611 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 AMHP03971 560 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 SRGAP2CP0DJJ0 459 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 GAP43P17677 238 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 PEX3P56589 373 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 ERVK-21P61565 698 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 TAP1Q03518 808 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 FAM160A1Q05DH4 1040 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 MCL1Q07820 350 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 DSC1Q08554 894 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 DMP1Q13316 513 aaPredicted RBP6.29□□□□□ -1.4
VPS36-202ENST00000462289 ALCAMQ13740 583 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 RAB30Q15771 203 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 MAPK6Q16659 721 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 FAM102BQ5T8I3 360 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 NOTUMQ6P988 496 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 AGMOQ6ZNB7 445 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 KRBA2Q6ZNG9 492 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 UNC13DQ70J99 1090 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 SV2BQ7L1I2 683 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 ARMCX6Q7L4S7 300 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 HAUS6Q7Z4H7 955 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 CMTR2Q8IYT2 770 aaKnown RBP6.29□□□□□ -1.4
VPS36-202ENST00000462289 RNF168Q8IYW5 571 aaPredicted RBP6.29□□□□□ -1.4
VPS36-202ENST00000462289 CNNM3Q8NE01 707 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 ZNF507Q8TCN5 953 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 MRPS27Q92552 414 aaKnown RBP6.29□□□□□ -1.4
VPS36-202ENST00000462289 PAGE5Q96GU1 130 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 CDK5RAP3Q96JB5 506 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 CASD1Q96PB1 797 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 PLIN2Q99541 437 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 KIFC3Q9BVG8 833 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 FGFBP2Q9BYJ0 223 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 HAPLN2Q9GZV7 340 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 INSL6Q9Y581 213 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 TSC2P49815 1807 aa6.29□□□□□ -1.4
VPS36-202ENST00000462289 UBE4BO95155 1302 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 A0A0B4J269 797 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 LCHNA4D1U4 455 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 LINC01553A4QN01 128 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 LRRIQ4A6NIV6 560 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 MEIS3P2A8K0S8 358 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 GRXCR1A8MXD5 290 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 OFD1O75665 1012 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 TOM1L1O75674 476 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 SLITRK5O94991 958 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 ZNF202O95125 648 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 PRKCBP05771 671 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 FGFR4P22455 802 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 ADSSP30520 456 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 SYKP43405 635 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 KCNJ6P48051 423 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 CASP5P51878 434 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 AMPD3Q01432 767 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 ZP2Q05996 745 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms