RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 WARSP23381 471 aaKnown RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 FCARP24071 287 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 GABRR2P28476 465 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 ATICP31939 592 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 RPL10AP62906 217 aaKnown RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 TNNC1P63316 161 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 PRKCQQ04759 706 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 DPYDQ12882 1025 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 BIRC3Q13489 604 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 TEAD2Q15562 447 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 MAPRE1Q15691 268 aaKnown RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 MLF2Q15773 248 aaPredicted RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 SOWAHAQ2M3V2 549 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 CFAP221Q4G0U5 840 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 FAM78AQ5JUQ0 283 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 C4orf50Q6ZRC1 276 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 LRRTM3Q86VH5 581 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 SPATA2LQ8IUW3 424 aaPredicted RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 ST13P5Q8NFI4 369 aaPredicted RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 ZSCAN18Q8TBC5 510 aaPredicted RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 DNASE1L2Q92874 299 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 SYAP1Q96A49 352 aaPredicted RBP9.45□□□□□ -0.9
SYN3-207ENST00000462268 MMS19Q96T76 1030 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 LPIN3Q9BQK8 851 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 LRRC3Q9BY71 257 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 KCTD10Q9H3F6 313 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 ATXN3LQ9H3M9 355 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 TRPV4Q9HBA0 871 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 DMAC2Q9NW81 257 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 ZMYM5Q9UJ78 669 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 CDH9Q9ULB4 789 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 FRMD4BQ9Y2L6 1034 aa9.45□□□□□ -0.9
SYN3-207ENST00000462268 TACC1O75410 805 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 CLSTN1O94985 981 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 CSH1P0DML2 217 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 CSH2P0DML3 217 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 GJA1P17302 382 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 PSMC3P17980 439 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 ACAT1P24752 427 aaKnown RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 RPL13P26373 211 aaKnown RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 STARD6P59095 220 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 TCF15Q12870 199 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 NFIL3Q16649 462 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 CEP135Q66GS9 1140 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 TANGO2Q6ICL3 276 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 LIMS2Q7Z4I7 341 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 OSTM1Q86WC4 334 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 CCDC105Q8IYK2 499 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 GUF1Q8N442 669 aaKnown RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 PARD3BQ8TEW8 1205 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 IRF7Q92985 503 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 PKMYT1Q99640 499 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 SYT15Q9BQS2 421 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 PI4K2AQ9BTU6 479 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 TRMT61BQ9BVS5 477 aaKnown RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 GTPBP4Q9BZE4 634 aaKnown RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 BRD9Q9H8M2 597 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 ZNF334Q9HCZ1 680 aaPredicted RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 TMLHEQ9NVH6 421 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 RMND1Q9NWS8 449 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 UXTQ9UBK9 157 aaPredicted RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 HOOK1Q9UJC3 728 aaKnown RBP9.44□□□□□ -0.9
SYN3-207ENST00000462268 TRAF3IP3Q9Y228 551 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 C2orf16Q68DN1 1984 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 ZDBF2Q9HCK1 2354 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 MUC6Q6W4X9 2439 aa9.44□□□□□ -0.9
SYN3-207ENST00000462268 PDCD11Q14690 1871 aaKnown RBP9.43□□□□□ -0.9
SYN3-207ENST00000462268 KANSL1LA0AUZ9 987 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 LRRIQ3A6PVS8 624 aaPredicted RBP9.43□□□□□ -0.9
SYN3-207ENST00000462268 DPYSL4O14531 572 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 MAPK13O15264 365 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 P4HA1P13674 534 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 NR2F2P24468 414 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 DDX6P26196 483 aaKnown RBP eCLIP9.43□□□□□ -0.98e-8■■■■■ 86.6
SYN3-207ENST00000462268 WEE1P30291 646 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 MAGEA11P43364 429 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 CASP4P49662 377 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 MYL6P60660 151 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 CLDN10P78369 228 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 FAM160A1Q05DH4 1040 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 NCOA4Q13772 614 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 GRM2Q14416 872 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 WDR72Q3MJ13 1102 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 SLC44A4Q53GD3 710 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 GPR158Q5T848 1215 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 FAM171BQ6P995 826 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 VSTM1Q6UX27 236 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 VITQ6UXI7 678 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
SYN3-207ENST00000462268 GAREM2Q75VX8 874 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 YAF2Q8IY57 180 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 FMR1NBQ8N0W7 255 aaPredicted RBP9.43□□□□□ -0.9
SYN3-207ENST00000462268 PJA1Q8NG27 643 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 TMC2Q8TDI7 906 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 GIPC2Q8TF65 315 aa9.43□□□□□ -0.9
SYN3-207ENST00000462268 KBTBD7Q8WVZ9 684 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms