RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SACM1LQ9NTJ5 587 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 CTTNBP2NLQ9P2B4 639 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 CDYLQ9Y232 598 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 PAXBP1Q9Y5B6 917 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 SNX13Q9Y5W8 968 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 COMMD10Q9Y6G5 202 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 AATKQ6ZMQ8 1374 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 POLR2AP24928 1970 aaKnown RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 A0A1W2PPC4 97 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 MBD3L4A6NDZ8 208 aaPredicted RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 MBD3L3A6NE82 208 aaPredicted RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 POM121BA6NF01 834 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 TMEM233B4DJY2 109 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 M0QYG6 137 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 NCK2O43639 380 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 TBC1D4O60343 1298 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 LDHAP00338 332 aaKnown RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 IL1R1P14778 569 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 FGFR4P22455 802 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 STT3AP46977 705 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 FAM189BP81408 668 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 RAB32Q13637 225 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 FAM160B1Q5W0V3 765 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 B3GNTL1Q67FW5 361 aaPredicted RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 LMBRD2Q68DH5 695 aaPredicted RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 ADGRG3Q86Y34 549 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 DNAJC5GQ8N7S2 189 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 FAM46DQ8NEK8 389 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 OR56A3Q8NH54 315 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 DEPTORQ8TB45 409 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 POC1BQ8TC44 478 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 ZSWIM1Q9BR11 485 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 BRIP1Q9BX63 1249 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 REXO4Q9GZR2 422 aaKnown RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 SIK2Q9H0K1 926 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 SYNPO2LQ9H987 977 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 STARD7Q9NQZ5 370 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 XPR1Q9UBH6 696 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 HESX1Q9UBX0 185 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 PADI4Q9UM07 663 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 SORCS3Q9UPU3 1222 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 ATP11BQ9Y2G3 1177 aa4.17□□□□□ -1.74
RFC4-211ENST00000460408 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.17□□□□□ -1.74
RFC4-211ENST00000460408 PYCARD-AS1I3L0S3 204 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 INO80B-WBP1J3KQ70 363 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 POLRMTO00411 1230 aaKnown RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 DCLK1O15075 740 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 FGF18O76093 207 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 SUN1O94901 812 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 ZFPL1O95159 310 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 CFIP05156 583 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 PARP1P09874 1014 aaKnown RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 ZFP36P26651 326 aaKnown RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 VIPR2P41587 438 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 WNT3P56703 355 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 HSD11B2P80365 405 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 PIGFQ07326 219 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 DGKKQ5KSL6 1271 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 KLHDC7AQ5VTJ3 777 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 DCAF12L1Q5VU92 463 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 IZUMO3Q5VZ72 239 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 HIBCHQ6NVY1 386 aaPredicted RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 TAPT1Q6NXT6 567 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 KCNV1Q6PIU1 500 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 GLCCI1Q86VQ1 547 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 LIX1LQ8IVB5 337 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 MAPKAPK5Q8IW41 473 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 SLC15A4Q8N697 577 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 NSUN7Q8NE18 718 aaKnown RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 BRI3BPQ8WY22 251 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 MED15Q96RN5 788 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 TRIB1Q96RU8 372 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 SLC46A2Q9BY10 475 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 INO80BQ9C086 356 aaPredicted RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 ZNF768Q9H5H4 540 aaKnown RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 PLCB1Q9NQ66 1216 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 A1CFQ9NQ94 594 aaKnown RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 TRPM5Q9NZQ8 1165 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 DKK2Q9UBU2 259 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 EIF2B4Q9UI10 523 aaKnown RBP4.16□□□□□ -1.74
RFC4-211ENST00000460408 KCNE5Q9UJ90 142 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 DMTF1Q9Y222 760 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 DAAM1Q9Y4D1 1078 aa4.16□□□□□ -1.74
RFC4-211ENST00000460408 CCDC195A0A1B0GUA6 201 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 ABHD14A-ACY1A0A1B0GW23 586 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 GAGE12BA1L429 117 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 GAGE12HA6NDE8 117 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 E7ENX8 843 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 TPD52L2O43399 206 aaKnown RBP4.15□□□□□ -1.75
RFC4-211ENST00000460408 SCAF4O95104 1147 aaKnown RBP4.15□□□□□ -1.75
RFC4-211ENST00000460408 GPANK1O95872 356 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 MT-ND5P03915 603 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 SPATA31D3P0C874 917 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 KCNA2P16389 499 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 KLRC1P26715 233 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 CD38P28907 300 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 MXRA7P84157 204 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 MC2RQ01718 297 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 TAP1Q03518 808 aa4.15□□□□□ -1.75
RFC4-211ENST00000460408 TAP2Q03519 686 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms