RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ARSEP51690 589 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 CUL3Q13618 768 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 RFX6Q8HWS3 928 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 KCTD6Q8NC69 237 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 PRMT1Q99873 361 aaKnown RBP16.22■□□□□ 0.19
LMNB1-203ENST00000460265 LRRC4CQ9HCJ2 640 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 NKIRAS1Q9NYS0 192 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 PROSCO94903 275 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 VNN1O95497 513 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 GSTA1P08263 222 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 SETSIPP0DME0 302 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 STX2P32856 288 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 SPATA21Q7Z572 469 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 ZDHHC14Q8IZN3 488 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 SNF8Q96H20 258 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 ADPGKQ9BRR6 497 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 NIF3L1Q9GZT8 377 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 CDC42EP4Q9H3Q1 356 aaKnown RBP16.22■□□□□ 0.19
LMNB1-203ENST00000460265 ECT2Q9H8V3 914 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 NGRNQ9NPE2 291 aaKnown RBP16.22■□□□□ 0.19
LMNB1-203ENST00000460265 COQ4Q9Y3A0 265 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 NFASCO94856 1347 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 A8MUI8 341 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 M0QYV0 167 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 LIN7AO14910 233 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-203ENST00000460265 ETS1P14921 441 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 ZNF268Q14587 947 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-203ENST00000460265 GPR162Q16538 588 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 HOMEZQ8IX15 550 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 REPS2Q8NFH8 660 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 IP6K2Q9UHH9 426 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 C2CD2Q9Y426 696 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 MAFBQ9Y5Q3 323 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-203ENST00000460265 INSRRP14616 1297 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 ABCD1P33897 745 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 ABL2P42684 1182 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 BASP1P80723 227 aaKnown RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 MAMLD1Q13495 774 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 ZC3H18Q86VM9 953 aaKnown RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 ANKMY2Q8IV38 441 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 HAPLN2Q9GZV7 340 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 SMARCAD1Q9H4L7 1026 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 ADARB2Q9NS39 739 aaKnown RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 CTNNAL1Q9UBT7 734 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 COL2A1P02458 1487 aaPredicted RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 ECHS1P30084 290 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 SLC1A1P43005 524 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 GCLCP48506 637 aaPredicted RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 NFX1Q12986 1120 aaKnown RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 AMHR2Q16671 573 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 HADHQ16836 314 aaKnown RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 GLRA4Q5JXX5 417 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 UBAP2Q5T6F2 1119 aaKnown RBP16.21■□□□□ 0.19
LMNB1-203ENST00000460265 C9orf131Q5VYM1 1079 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 RIOX2Q8IUF8 465 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 SYT11Q9BT88 431 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 PIDD1Q9HB75 910 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 LMCD1Q9NZU5 365 aa16.21■□□□□ 0.19
LMNB1-203ENST00000460265 NRXN2Q9P2S2 1712 aa16.21■□□□□ 0.18
LMNB1-203ENST00000460265 A6NHS1 94 aa16.21■□□□□ 0.18
LMNB1-203ENST00000460265 ZC3H11AO75152 810 aaKnown RBP eCLIP16.21■□□□□ 0.185e-20■■□□□ 11.5
LMNB1-203ENST00000460265 TJP3O95049 919 aa16.21■□□□□ 0.18
LMNB1-203ENST00000460265 MFSD7Q6UXD7 560 aa16.21■□□□□ 0.18
LMNB1-203ENST00000460265 AFG1LQ8WV93 481 aa16.21■□□□□ 0.18
LMNB1-203ENST00000460265 TMEM121Q9BTD3 319 aa16.21■□□□□ 0.18
LMNB1-203ENST00000460265 UBOX5O94941 541 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 CALB1P05937 261 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 TCF4P15884 667 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 CHKAP35790 457 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 PPP1R15BQ5SWA1 713 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 FAM102AQ5T9C2 384 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-203ENST00000460265 NUGGCQ68CJ6 796 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 TRIM72Q6ZMU5 477 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 TMEM192Q8IY95 271 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 FBXL18Q96ME1 805 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 RBM15Q96T37 977 aaKnown RBP eCLIP16.2■□□□□ 0.18
LMNB1-203ENST00000460265 PPP1R12CQ9BZL4 782 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 MIS12Q9H081 205 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 RNPEPQ9H4A4 650 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 A0A1B0GVG6 124 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 EXOC1LA0A1B0GW35 172 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 GBP1P32455 592 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 BBS9Q3SYG4 887 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 PPP6R3Q5H9R7 873 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-203ENST00000460265 CCDC33Q8N5R6 958 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 FBF1Q8TES7 1133 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 ABCF3Q9NUQ8 709 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 FAM49BQ9NUQ9 324 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 ZNF112Q9UJU3 913 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 MROH7Q68CQ1 1323 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 SPDYE5A6NIY4 337 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 F5H423 210 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-203ENST00000460265 SPAG7O75391 227 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 LGR5O75473 907 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 ARL2P36404 184 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 NOMO3P69849 1222 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 FAM47EQ6ZV65 393 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 ZNF677Q86XU0 584 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms