RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 RBM20Q5T481 1227 aaKnown RBP3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 LMBRD2Q68DH5 695 aaPredicted RBP3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 ZNF783Q6ZMS7 281 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 FAM109AQ8N4B1 249 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 MYCBPAPQ8TBZ2 947 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 ACTRT2Q8TDY3 377 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 ANKS1AQ92625 1134 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 FAM136AQ96C01 138 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 SUCLG2Q96I99 432 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 FBXL20Q96IG2 436 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 PDLIM2Q96JY6 352 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 DPH1Q9BZG8 443 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 TPSD1Q9BZJ3 242 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 TTYH3Q9C0H2 523 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 KLC4Q9NSK0 619 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 FOXJ2Q9P0K8 574 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 C11orf21Q9P2W6 132 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 ZNHIT2Q9UHR6 403 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 TMX2Q9Y320 296 aa3.76□□□□□ -1.81
SCARNA18-201ENST00000459004 A6NNZ2 444 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 ISM1B1AKI9 464 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 FRS3O43559 492 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 ORC4O43929 436 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 PARNO95453 639 aaKnown RBP3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 EN2P19622 333 aaPredicted RBP3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 SLC7A1P30825 629 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 PXNP49023 591 aaPredicted RBP3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 SLC11A2P49281 568 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 UCP3P55916 312 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 WNT3P56703 355 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 LOXL3P58215 753 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 FAM193AP78312 1265 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 SATB1Q01826 763 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 CTBP1Q13363 440 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 GRM3Q14832 879 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 SMN1Q16637 294 aaKnown RBP3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 RNF220Q5VTB9 566 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 ICE2Q659A1 982 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 KAZNQ674X7 775 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 SWSAP1Q6NVH7 229 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 TMEM108Q6UXF1 575 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 CCDC149Q6ZUS6 474 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 COL23A1Q86Y22 540 aaPredicted RBP3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 DNAJC5GQ8N7S2 189 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 FAM156AQ8NDB6 213 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 SIMC1Q8NDZ2 872 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 PTDSS2Q9BVG9 487 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 C22orf23Q9BZE7 217 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 SYNPO2LQ9H987 977 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 ALG13Q9NP73 1137 aaKnown RBP3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 CHPF2Q9P2E5 772 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 TPCN1Q9ULQ1 816 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 PAXBP1Q9Y5B6 917 aa3.75□□□□□ -1.81
SCARNA18-201ENST00000459004 USP19O94966 1318 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ADGRA2Q96PE1 1338 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 A0A087WWL8 130 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 WDR27A2RRH5 827 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ZAR1LA6NP61 321 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 MYO1FO00160 1098 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 TPP1O14773 563 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 KIAA0355O15063 1070 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 CHRM2P08172 466 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 BMP5P22003 454 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 LRPAP1P30533 357 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 GRIA3P42263 894 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ZNF134P52741 427 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 SUMO3P55854 103 aaPredicted RBP3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 LILRA4P59901 499 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 SIM1P81133 766 aaPredicted RBP3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 SLC13A2Q13183 592 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 RAB32Q13637 225 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 TXNRD1Q16881 649 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 KIAA0753Q2KHM9 967 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 STRIP1Q5VSL9 837 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 PPP4R4Q6NUP7 873 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 DARS2Q6PI48 645 aaKnown RBP3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 APOA5Q6Q788 366 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 DTX2Q86UW9 622 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 SLC15A4Q8N697 577 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 LRTOMTQ8WZ04 291 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 TFAP2BQ92481 460 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ZG16BQ96DA0 208 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 DUSP26Q9BV47 211 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ALG8Q9BVK2 526 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ACTRT3Q9BYD9 372 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 LRRC27Q9C0I9 530 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 SMURF2Q9HAU4 748 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 EHD3Q9NZN3 535 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 TLK1Q9UKI8 766 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 SHOC2Q9UQ13 582 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 INSL6Q9Y581 213 aa3.74□□□□□ -1.81
SCARNA18-201ENST00000459004 ADM5C9JUS6 153 aa3.73□□□□□ -1.81
SCARNA18-201ENST00000459004 GOLIM4O00461 696 aa3.73□□□□□ -1.81
SCARNA18-201ENST00000459004 TBX3O15119 743 aa3.73□□□□□ -1.81
SCARNA18-201ENST00000459004 MGEA5O60502 916 aa3.73□□□□□ -1.81
SCARNA18-201ENST00000459004 NUDT3O95989 172 aa3.73□□□□□ -1.81
SCARNA18-201ENST00000459004 MYF5P13349 255 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms