RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PIGRP01833 764 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 PEX19P40855 299 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 ABL2P42684 1182 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 ERFP50548 548 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 GAD2Q05329 585 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 CCL15Q16663 113 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 ZFYVE27Q5T4F4 411 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 TRMT10CQ7L0Y3 403 aaKnown RBP13.11□□□□□ -0.31
LINC00959-201ENST00000456581 CKAP2Q8WWK9 683 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
LINC00959-201ENST00000456581 ACO2Q99798 780 aaKnown RBP13.11□□□□□ -0.31
LINC00959-201ENST00000456581 SUN1O94901 812 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 NOP14P78316 857 aaKnown RBP13.11□□□□□ -0.31
LINC00959-201ENST00000456581 GCNT1Q02742 428 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 BNIP1Q12981 228 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 P3H1Q32P28 736 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 IZUMO3Q5VZ72 239 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 GSTA5Q7RTV2 222 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
LINC00959-201ENST00000456581 GPRC5AQ8NFJ5 357 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 AFG1LQ8WV93 481 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 P3H4Q92791 437 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 MROH8Q9H579 483 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 EBF2Q9HAK2 575 aa13.11□□□□□ -0.31
LINC00959-201ENST00000456581 RASA4BC9J798 803 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 RASA4O43374 803 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TARSP26639 723 aaKnown RBP13.1□□□□□ -0.31
LINC00959-201ENST00000456581 ARHGAP1Q07960 439 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 NCOA4Q13772 614 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 ZNF268Q14587 947 aaPredicted RBP13.1□□□□□ -0.31
LINC00959-201ENST00000456581 IER5Q5VY09 327 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TAPT1Q6NXT6 567 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 MAMDC4Q6UXC1 1216 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 BZW1Q7L1Q6 419 aaKnown RBP13.1□□□□□ -0.31
LINC00959-201ENST00000456581 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 WHRNQ9P202 907 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 PCDHB4Q9Y5E5 795 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 H0Y3Z8 333 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 ABLIM1O14639 778 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 VTNP04004 478 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 INSRRP14616 1297 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TAC1P20366 129 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 SLC8A1P32418 973 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 MYL6P60660 151 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TFAMQ00059 246 aaKnown RBP13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 MAPK6Q16659 721 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 SCARA5Q6ZMJ2 495 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 SERPINB12Q96P63 405 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 MAF1Q9H063 256 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
LINC00959-201ENST00000456581 SAE1Q9UBE0 346 aaPredicted RBP13.1□□□□□ -0.31
LINC00959-201ENST00000456581 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 TOM1L1O75674 476 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 GSTA1P08263 222 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 GCAP28676 217 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 RPL7AP62424 266 aaKnown RBP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 CUL2Q13617 745 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 PTK6Q13882 451 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 ZNF449Q6P9G9 518 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 RBM15Q96T37 977 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 PTPN18Q99952 460 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 STMN4Q9H169 189 aaPredicted RBP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 MYLK2Q9H1R3 596 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 ETNK1Q9HBU6 452 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 LGALS2P05162 132 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 ATF7P17544 494 aaPredicted RBP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 ITIH2P19823 946 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 EFTUD2Q15029 972 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
LINC00959-201ENST00000456581 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 PLPPR4Q7Z2D5 763 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 FAM167AQ96KS9 214 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 SAYSD1Q9NPB0 183 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 ARL2BPQ9Y2Y0 163 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 SIP14410 1827 aa13.09□□□□□ -0.31
LINC00959-201ENST00000456581 A0A1W2PPM1 405 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 WDR91A4D1P6 747 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 ADCY6O43306 1168 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 CBX6O95503 412 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 MSH2P43246 934 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 TUBP50607 506 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 TCEAL1Q15170 157 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 ZNF792Q3KQV3 632 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms