RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 USP32Q8NFA0 1604 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 NEXMIFQ5QGS0 1516 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 GOLGA8JA6NMD2 632 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 FAM196BA6NMK8 535 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PP2D1A8MPX8 630 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PDLIM1O00151 329 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 KATNA1O75449 491 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 GJB6O95452 261 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 SLC9A1P19634 815 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 IL12AP29459 219 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 COPB2P35606 906 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PRKCIP41743 596 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 KCNJ1P48048 391 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 HK2P52789 917 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 EIF6P56537 245 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TUBA1BP68363 451 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 OTUD4Q01804 1114 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 YWHAHQ04917 246 aaPredicted RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 DUPD1Q68J44 220 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PPP4R4Q6NUP7 873 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 C4orf50Q6ZRC1 276 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TUBA1AQ71U36 451 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TMEM110Q86TL2 294 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 EXD1Q8NHP7 514 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 DQX1Q8TE96 717 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TLCD1Q96CP7 247 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 SLC10A4Q96EP9 437 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 MCRS1Q96EZ8 462 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 ZFYVE19Q96K21 471 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 INPP4AQ96PE3 977 aaPredicted RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 SPATA16Q9BXB7 569 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 DCLK3Q9C098 648 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 CEP44Q9C0F1 390 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 KANSL2Q9H9L4 492 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 LRRC42Q9Y546 428 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 GPC6Q9Y625 555 aaPredicted RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 EFCAB6Q5THR3 1501 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 GLI2P10070 1586 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TYW5A2RUC4 315 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TAF4O00268 1085 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 LSM1O15116 133 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 ENTPD5O75356 428 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 KRT36O76013 467 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 CAPN1P07384 714 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 RARAP10276 462 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 FASP25445 335 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 GNA15P30679 374 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 HADHAP40939 763 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PRELPP51888 382 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 RAD23AP54725 363 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 ACTR2P61160 394 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 USP46P62068 366 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TRIM28Q13263 835 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 NR1D2Q14995 579 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 KCTD21Q4G0X4 260 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 COBLL1Q53SF7 1204 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 EPHA10Q5JZY3 1008 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 EMC10Q5UCC4 262 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 RNF220Q5VTB9 566 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 OR6B2Q6IFH4 312 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 DPP8Q6V1X1 898 aaPredicted RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 CAMK1DQ8IU85 385 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 DEFB107AQ8IZN7 70 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 DCAF4Q8WV16 495 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PAFAH2Q99487 392 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 OSBPL6Q9BZF3 934 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 FANCEQ9HB96 536 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TMEM165Q9HC07 324 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PCMTD2Q9NV79 361 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 MARCOQ9UEW3 520 aaPredicted RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 LOC100653049A0A140TA62 436 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 EDF1O60869 148 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 KRT34O76011 436 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 ITGA2BP08514 1039 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 RPL21P46778 160 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 TOB1P50616 345 aaPredicted RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 NAB1Q13506 487 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 DPYSQ14117 519 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PDPK2PQ6A1A2 396 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 ACAD10Q6JQN1 1059 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 RWDD4Q6NW29 188 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 C6orf89Q6UWU4 347 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PURBQ96QR8 312 aaKnown RBP5.21□□□□□ -1.58
PCDH9-203ENST00000456367 EPAS1Q99814 870 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 PCDH9Q9HC56 1237 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 NINJ2Q9NZG7 142 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 FIS1Q9Y3D6 152 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 SNX13Q9Y5W8 968 aa5.21□□□□□ -1.58
PCDH9-203ENST00000456367 ATP8B3O60423 1300 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 HEATR9A2RTY3 570 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 ZSCAN5CA6NGD5 496 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-203ENST00000456367 MEIS1O00470 390 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 APOL1O14791 398 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 ZBTB5O15062 677 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 CLOCKO15516 846 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 IDH3BO43837 385 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 BAIAP3O94812 1187 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 ASMTLO95671 621 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 PYGMP11217 842 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms