RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 NDUFA8P51970 172 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 SNRPFP62306 86 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 NFE2Q16621 373 aaPredicted RBP17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 MFSD6LQ8IWD5 586 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 KIAA0895Q8NCT3 520 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 DEPDC1BQ8WUY9 529 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 DNASE1L2Q92874 299 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 FNBP1Q96RU3 617 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 PKMYT1Q99640 499 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 CGRRF1Q99675 332 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 GZF1Q9H116 711 aaPredicted RBP17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 MYBPHLA2RUH7 354 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 PROB1E7EW31 1015 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 ZNF263O14978 683 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 EXOC3O60645 756 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 LMO2P25791 158 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 SYKP43405 635 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 LHX1P48742 406 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 CASP4P49662 377 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 DDR2Q16832 855 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 ARHGAP15Q53QZ3 475 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 ASCL5Q7RTU5 278 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 C12orf56Q8IXR9 622 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 KBTBD7Q8WVZ9 684 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 ZNF516Q92618 1163 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 IRF7Q92985 503 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 LRRC3BQ96PB8 259 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 GCNAQ96QF7 691 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 MMS19Q96T76 1030 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 SMG9Q9H0W8 520 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 GDPD2Q9HCC8 539 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 MAGED2Q9UNF1 606 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 TICRRQ7Z2Z1 1910 aa17.64■□□□□ 0.41
NCKIPSD-208ENST00000454134 PRAMEF12O95522 483 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 HMGA1P17096 107 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 PCSK1P29120 753 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 CDC25CP30307 473 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 PSMC1P62191 440 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 ZNF852Q6ZMS4 543 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 LIMS2Q7Z4I7 341 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 TMEM150AQ86TG1 271 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 C1orf210Q8IVY1 113 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 YAF2Q8IY57 180 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 SPATA18Q8TC71 538 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 PLEKHO2Q8TD55 490 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 SLC46A2Q9BY10 475 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 BCO2Q9BYV7 579 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 TASP1Q9H6P5 420 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 SPATA6Q9NWH7 488 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 CGNQ9P2M7 1197 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 NDRG2Q9UN36 371 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 COL4A2P08572 1712 aa17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 ZFHX2Q9C0A1 2572 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-208ENST00000454134 USP34Q70CQ2 3546 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 ARNTLO00327 626 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 PDGFRBP09619 1106 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 NLRP12P59046 1061 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 DPH6Q7L8W6 267 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 SPATA2LQ8IUW3 424 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 FSIP1Q8NA03 581 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 E2F7Q96AV8 911 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 ZFYVE19Q96K21 471 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 SYT15Q9BQS2 421 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 MRPL45Q9BRJ2 306 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 OSBPL6Q9BZF3 934 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 GOLPH3LQ9H4A5 285 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 ABCB6Q9NP58 842 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 PIAS3Q9Y6X2 628 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 R4GN57 208 aa17.62■□□□□ 0.41
NCKIPSD-208ENST00000454134 FAM237AA0A1B0GTK4 181 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 PRR23AA6NEV1 266 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 DPYSL4O14531 572 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 F11P03951 625 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 RPN1P04843 607 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 SP9P0CG40 484 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 WARSP23381 471 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 MYL6P60660 151 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 RPL10AP62906 217 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 FCHO2Q0JRZ9 810 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 PSMD2Q13200 908 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 FAM171BQ6P995 826 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 SCN4BQ8IWT1 228 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 MAML2Q8IZL2 1156 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 TTC8Q8TAM2 541 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 GOLGA5Q8TBA6 731 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 NKD2Q969F2 451 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 NELL2Q99435 816 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 SCAND2PQ9GZW5 306 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 KCTD10Q9H3F6 313 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 CRTAC1Q9NQ79 661 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 TRPV5Q9NQA5 729 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 DMAC2Q9NW81 257 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 CDH9Q9ULB4 789 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 MRPS17Q9Y2R5 130 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 NME7Q9Y5B8 376 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 ATP6V1DQ9Y5K8 247 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 VPS13AQ96RL7 3174 aa17.61■□□□□ 0.41
NCKIPSD-208ENST00000454134 NUP210Q8TEM1 1887 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms