RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TRIM71Q2Q1W2 868 aaKnown RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SPOCD1Q6ZMY3 1216 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 PRR23BQ6ZRT6 265 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 GPRIN1Q7Z2K8 1008 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 GAS2L3Q86XJ1 694 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC44A2Q8IWA5 706 aaPredicted RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 CCDC89Q8N998 374 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 CCDC150Q8NCX0 1101 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC17A8Q8NDX2 589 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 NLGN4YQ8NFZ3 816 aaPredicted RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 ADAMTS18Q8TE60 1221 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 DDX17Q92841 729 aaKnown RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 RRP36Q96EU6 259 aaKnown RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 LRIG1Q96JA1 1093 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 DIRC2Q96SL1 478 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 CPEB1Q9BZB8 566 aaKnown RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 TWSG1Q9GZX9 223 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 TP63Q9H3D4 680 aaPredicted RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 UNC45AQ9H3U1 944 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 L2HGDHQ9H9P8 463 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SAYSD1Q9NPB0 183 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 JADE2Q9NQC1 790 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 PCMTD2Q9NV79 361 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 BCCIPQ9P287 314 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 NCDNQ9UBB6 729 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 DNMT3BQ9UBC3 853 aaKnown RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 HESX1Q9UBX0 185 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 FBXO2Q9UK22 296 aaPredicted RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC13A4Q9UKG4 626 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 PMF1-BGLAPU3KQ54 211 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 LOC102723971A0A1B0GUV8 181 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 CDHR4A6H8M9 788 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 OR2W5A6NFC9 320 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 HMX3A6NHT5 357 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 TBX18O95935 607 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 POMCP01189 267 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 PRKCBP05771 671 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 ITGA2BP08514 1039 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 SNRPA1P09661 255 aaKnown RBP4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 KLRK1P26718 216 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 ARHGEF7Q14155 803 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 ATP2B3Q16720 1220 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 ZNF750Q32MQ0 723 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 VWA3BQ502W6 1294 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 PLA1AQ53H76 456 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM160B1Q5W0V3 765 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 KRT40Q6A162 431 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAAH2Q6GMR7 532 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 USP17L6PQ6QN14 398 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 KLHL17Q6TDP4 642 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 C2CD5Q86YS7 1000 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 SIAH1Q8IUQ4 282 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 ZFPM1Q8IX07 1006 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 PDPRQ8NCN5 879 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 IPCEF1Q8WWN9 437 aaPredicted RBP4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 RUBCNQ92622 972 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 RABGGTAQ92696 567 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 HDAC2Q92769 488 aaKnown RBP4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 BORCS6Q96GS4 357 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 SERINC2Q96SA4 455 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 AGXT2Q9BYV1 514 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 EPS8L2Q9H6S3 715 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 IL23AQ9NPF7 189 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 USP40Q9NVE5 1235 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 ETAA1Q9NY74 926 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 DAPP1Q9UN19 280 aa4.85□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM90A18PA6NE21 464 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM90A16PA6NEW6 464 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM90A9PA6NNJ1 464 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM90A5PA8MXJ8 464 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 H0Y3Z8 333 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 MYO1CO00159 1063 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 HYAL3O43820 417 aaPredicted RBP4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 TRIM13O60858 407 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 ANXA6P08133 673 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM90A15PP0C7V4 464 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM90A14PP0C7W9 464 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 ARP10275 920 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 MST1P26927 711 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 VIPR2P41587 438 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 PTDSS1P48651 473 aaKnown RBP4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 WNT3P56703 355 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 AP2B1P63010 937 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 MXRA7P84157 204 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 DLGAP5Q15398 846 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 SURF1Q15526 300 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 AMOTQ4VCS5 1084 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC45A4Q5BKX6 768 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 NOMO2Q5JPE7 1267 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 L1TD1Q5T7N2 865 aaKnown RBP4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC9C2Q5TAH2 1124 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 MANEALQ5VSG8 457 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 RRAGAQ7L523 313 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 GATAD2AQ86YP4 633 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 TXNDC5Q8NBS9 432 aaKnown RBP4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 TBC1D15Q8TC07 691 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 AFG1LQ8WV93 481 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 THAP4Q8WY91 577 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 ERP27Q96DN0 273 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 NEIL1Q96FI4 390 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms