RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TRAIPQ9BWF2 469 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 ATRNL1Q5VV63 1379 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 CAPN9O14815 690 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 MCF2LO15068 1137 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 RARGP13631 454 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 PECAM1P16284 738 aaPredicted RBP11.74□□□□□ -0.53
DDR1-239ENST00000452441 GLRA2P23416 452 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 ATF7IP2Q5U623 682 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 ZDHHC14Q8IZN3 488 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 PDIK1LQ8N165 341 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 FEZF2Q8TBJ5 459 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 MAIP1Q8WWC4 291 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 CFAP57Q96MR6 1250 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 SENP7Q9BQF6 1050 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 CISHQ9NSE2 258 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 GRHL1Q9NZI5 618 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 SIPA1L1O43166 1804 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 A0A087WZ62 844 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 C2orf71A6NGG8 1288 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 MAFGO15525 162 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 NUDT17P0C025 328 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 RBP3P10745 1247 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 ELF1P32519 619 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 MMP13P45452 471 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 CLEC16AQ2KHT3 1053 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 PREPLQ4J6C6 727 aaPredicted RBP11.74□□□□□ -0.53
DDR1-239ENST00000452441 LVRNQ6Q4G3 990 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 NPNTQ6UXI9 565 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 FAM228AQ86W67 206 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 ACTL9Q8TC94 416 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 FDXACB1Q9BRP7 624 aaPredicted RBP11.74□□□□□ -0.53
DDR1-239ENST00000452441 KDM4CQ9H3R0 1056 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 PARVAQ9NVD7 372 aa11.74□□□□□ -0.53
DDR1-239ENST00000452441 FNDC3AQ9Y2H6 1198 aaKnown RBP11.74□□□□□ -0.53
DDR1-239ENST00000452441 USP15Q9Y4E8 981 aaPredicted RBP11.74□□□□□ -0.53
DDR1-239ENST00000452441 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 DHX15O43143 795 aaKnown RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 SLC26A4O43511 780 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 AVILO75366 819 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 CBX6O95503 412 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 AGTP01019 485 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 LCP1P13796 627 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 EIF3EP60228 445 aaKnown RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 GTF2BQ00403 316 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 OTUD4Q01804 1114 aaKnown RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 EFTUD2Q15029 972 aaKnown RBP eCLIP11.73□□□□□ -0.534e-6■■■■□ 22.5
DDR1-239ENST00000452441 MAP4K3Q8IVH8 894 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 FAM71AQ8IYT1 594 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 ANKRD13AQ8IZ07 590 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 ATXN2LQ8WWM7 1075 aaKnown RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 STAMBPL1Q96FJ0 436 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 PGM2Q96G03 612 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 ZNF317Q96PQ6 595 aaPredicted RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 LRRC37BQ96QE4 947 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 NOD2Q9HC29 1040 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 PCDHA3Q9Y5H8 950 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 CELF2O95319 508 aaKnown RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 WNT7BP56706 349 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 SESN2P58004 480 aaPredicted RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 ELF3P78545 371 aaPredicted RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 SP2Q02086 613 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 GAD2Q05329 585 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 HIF1AQ16665 826 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 NINJ2Q9NZG7 142 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 BHMG1C9JSJ3 638 aaPredicted RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 CREB3O43889 395 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 PRPSAP2O60256 369 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 C6orf222P0C671 652 aaPredicted RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 P4HA1P13674 534 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 PDGFRAP16234 1089 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 SLC8A1P32418 973 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 LAMTOR4Q0VGL1 99 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 XRCC4Q13426 336 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 BMPR2Q13873 1038 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 HACE1Q8IYU2 909 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 TXLNGYQ9BZA5 131 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 ADAM7Q9H2U9 754 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 DHX35Q9H5Z1 703 aaKnown RBP11.73□□□□□ -0.53
DDR1-239ENST00000452441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDR1-239ENST00000452441 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
DDR1-239ENST00000452441 A0A1W2PPM1 405 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 TXNDC9O14530 226 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 KCNN4O15554 427 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 TTC4O95801 387 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 F7P08709 466 aaPredicted RBP11.72□□□□□ -0.53
DDR1-239ENST00000452441 ITIH2P19823 946 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 PTGIRP43119 386 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 CTCFP49711 727 aaPredicted RBP11.72□□□□□ -0.53
DDR1-239ENST00000452441 KDSRQ06136 332 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 CACNB2Q08289 660 aaPredicted RBP11.72□□□□□ -0.53
DDR1-239ENST00000452441 CFAP61Q8NHU2 1237 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 HELQQ8TDG4 1101 aa11.72□□□□□ -0.53
DDR1-239ENST00000452441 SHC3Q92529 594 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms