RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 SLC44A4Q53GD3 710 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 SDHAF4Q5VUM1 108 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 CEP135Q66GS9 1140 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 LIMS2Q7Z4I7 341 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 SLC9A9Q8IVB4 645 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 CCDC34Q96HJ3 373 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 GCNAQ96QF7 691 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 SYT15Q9BQS2 421 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 FOXQ1Q9C009 403 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 GPR88Q9GZN0 384 aa19.22■□□□□ 0.67
CTNS-204ENST00000452111 MYBPHLA2RUH7 354 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 ATP2C2O75185 946 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 PDGFRBP09619 1106 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 CYP2F1P24903 491 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 MYL6P60660 151 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 CYP4F8P98187 520 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 KCNB1Q14721 858 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 DDR2Q16832 855 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 GPR158Q5T848 1215 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 TDRD10Q5VZ19 366 aaKnown RBP19.21■□□□□ 0.67
CTNS-204ENST00000452111 PHLDB3Q6NSJ2 640 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 VITQ6UXI7 678 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 SPATA2LQ8IUW3 424 aaPredicted RBP19.21■□□□□ 0.67
CTNS-204ENST00000452111 GPIHBP1Q8IV16 184 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 FMR1NBQ8N0W7 255 aaPredicted RBP19.21■□□□□ 0.67
CTNS-204ENST00000452111 PARD3BQ8TEW8 1205 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 SHDQ96IW2 340 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 MRPL45Q9BRJ2 306 aaKnown RBP19.21■□□□□ 0.67
CTNS-204ENST00000452111 TRMT61BQ9BVS5 477 aaKnown RBP19.21■□□□□ 0.67
CTNS-204ENST00000452111 BRD9Q9H8M2 597 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 FAM86C1Q9NVL1 165 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 NXF1Q9UBU9 619 aaKnown RBP19.21■□□□□ 0.67
CTNS-204ENST00000452111 NCANO14594 1321 aa19.21■□□□□ 0.67
CTNS-204ENST00000452111 HEPACAM2A8MVW5 462 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 DCNP07585 359 aaKnown RBP19.2■□□□□ 0.66
CTNS-204ENST00000452111 WARSP23381 471 aaKnown RBP19.2■□□□□ 0.66
CTNS-204ENST00000452111 CDC25CP30307 473 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 DLG4P78352 724 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 PNOCQ13519 176 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 WDR72Q3MJ13 1102 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 ARHGAP15Q53QZ3 475 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 TMEM174Q8WUU8 243 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 MYLPFQ96A32 169 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 SYAP1Q96A49 352 aaPredicted RBP19.2■□□□□ 0.66
CTNS-204ENST00000452111 PHOX2BQ99453 314 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 MKNK1Q9BUB5 465 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 SNX25Q9H3E2 840 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 TRPV4Q9HBA0 871 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 IL21Q9HBE4 155 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 ABCB6Q9NP58 842 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 CDH9Q9ULB4 789 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 MAGED2Q9UNF1 606 aaPredicted RBP19.2■□□□□ 0.66
CTNS-204ENST00000452111 TRAF3IP3Q9Y228 551 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 FRMD4BQ9Y2L6 1034 aa19.2■□□□□ 0.66
CTNS-204ENST00000452111 PSMC3P17980 439 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 NR2F2P24468 414 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 GDI1P31150 447 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 STARD6P59095 220 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 PRKCQQ04759 706 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 FAM171BQ6P995 826 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 TPRG1Q6ZUI0 275 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 ARID3BQ8IVW6 561 aaPredicted RBP19.19■□□□□ 0.66
CTNS-204ENST00000452111 SCN4BQ8IWT1 228 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 CCDC105Q8IYK2 499 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 SMYD4Q8IYR2 804 aaPredicted RBP19.19■□□□□ 0.66
CTNS-204ENST00000452111 GUF1Q8N442 669 aaKnown RBP19.19■□□□□ 0.66
CTNS-204ENST00000452111 DTWD2Q8NBA8 298 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 OR6B3Q8NGW1 331 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 DEPDC1BQ8WUY9 529 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 ATOH1Q92858 354 aaPredicted RBP19.19■□□□□ 0.66
CTNS-204ENST00000452111 ELMO3Q96BJ8 720 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 RSPRY1Q96DX4 576 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 XYLT2Q9H1B5 865 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 CRTAC1Q9NQ79 661 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 HEBP1Q9NRV9 189 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 SIT1Q9Y3P8 196 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 CACNA1HO95180 2353 aa19.19■□□□□ 0.66
CTNS-204ENST00000452111 COL4A3Q01955 1670 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 TACC1O75410 805 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 STAU1O95793 577 aaKnown RBP19.18■□□□□ 0.66
CTNS-204ENST00000452111 C4BPAP04003 597 aaKnown RBP19.18■□□□□ 0.66
CTNS-204ENST00000452111 HMGA1P17096 107 aaKnown RBP19.18■□□□□ 0.66
CTNS-204ENST00000452111 CD72P21854 359 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 ATICP31939 592 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 GNL1P36915 607 aaPredicted RBP19.18■□□□□ 0.66
CTNS-204ENST00000452111 AP3M2P53677 418 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 RPL10AP62906 217 aaKnown RBP19.18■□□□□ 0.66
CTNS-204ENST00000452111 CLDN10P78369 228 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 NCOA4Q13772 614 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 UBXN2BQ14CS0 331 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 ZNF699Q32M78 642 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 CFAP221Q4G0U5 840 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 C4orf50Q6ZRC1 276 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 ALYREFQ86V81 257 aaKnown RBP19.18■□□□□ 0.66
CTNS-204ENST00000452111 PJA1Q8NG27 643 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 FUBP3Q96I24 572 aaKnown RBP eCLIP19.18■□□□□ 0.66
CTNS-204ENST00000452111 TASP1Q9H6P5 420 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 NME7Q9Y5B8 376 aa19.18■□□□□ 0.66
CTNS-204ENST00000452111 KANSL1LA0AUZ9 987 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 DPYSL4O14531 572 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms