RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 COL4A3Q01955 1670 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 A0A1B0GVL5 298 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 PFKFB1P16118 471 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 RPL10AP62906 217 aaKnown RBP21.13■□□□□ 0.97
VCP-203ENST00000448530 PSMD6Q15008 389 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 KNOP1Q1ED39 458 aaKnown RBP21.13■□□□□ 0.97
VCP-203ENST00000448530 TRAPPC11Q7Z392 1133 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 PAGE5Q96GU1 130 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 TASP1Q9H6P5 420 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 ABCB6Q9NP58 842 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 TMLHEQ9NVH6 421 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 GTF3C4Q9UKN8 822 aa21.13■□□□□ 0.97
VCP-203ENST00000448530 NUP210Q8TEM1 1887 aaPredicted RBP21.13■□□□□ 0.97
VCP-203ENST00000448530 ACTN4O43707 911 aaKnown RBP21.12■□□□□ 0.97
VCP-203ENST00000448530 EXOC3O60645 756 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 GLULP15104 373 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 CYP24A1Q07973 514 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 PSMD2Q13200 908 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 SOWAHAQ2M3V2 549 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 SCARA3Q6AZY7 606 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 SPATA2LQ8IUW3 424 aaPredicted RBP21.12■□□□□ 0.97
VCP-203ENST00000448530 GPIHBP1Q8IV16 184 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 MMS19Q96T76 1030 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 CGRRF1Q99675 332 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 ZMYM5Q9UJ78 669 aa21.12■□□□□ 0.97
VCP-203ENST00000448530 LAMTOR5O43504 91 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 CSH1P0DML2 217 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 CSH2P0DML3 217 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 TARSP26639 723 aaKnown RBP21.11■□□□□ 0.97
VCP-203ENST00000448530 CYP4F8P98187 520 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 ZC3H14Q6PJT7 736 aaKnown RBP21.11■□□□□ 0.97
VCP-203ENST00000448530 OSTM1Q86WC4 334 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 C12orf56Q8IXR9 622 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 CCDC47Q96A33 483 aaKnown RBP21.11■□□□□ 0.97
VCP-203ENST00000448530 IL21Q9HBE4 155 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 OBP2AQ9NY56 170 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 NDRG2Q9UN36 371 aaKnown RBP21.11■□□□□ 0.97
VCP-203ENST00000448530 MAGED2Q9UNF1 606 aaPredicted RBP21.11■□□□□ 0.97
VCP-203ENST00000448530 PIAS3Q9Y6X2 628 aa21.11■□□□□ 0.97
VCP-203ENST00000448530 PRR23AA6NEV1 266 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 GABRDO14764 452 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 CHADO15335 359 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 MYL1P05976 194 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 CYP2F1P24903 491 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 SYKP43405 635 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 KPNA1P52294 538 aaPredicted RBP21.1■□□□□ 0.97
VCP-203ENST00000448530 TRPC3Q13507 836 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 ARHGAP29Q52LW3 1261 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 C4orf50Q6ZRC1 276 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 ASCL5Q7RTU5 278 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 FAM3CQ92520 227 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 RSPRY1Q96DX4 576 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 SYT15Q9BQS2 421 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 MKNK1Q9BUB5 465 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 SCAND2PQ9GZW5 306 aaPredicted RBP21.1■□□□□ 0.97
VCP-203ENST00000448530 UXTQ9UBK9 157 aaPredicted RBP21.1■□□□□ 0.97
VCP-203ENST00000448530 CDH9Q9ULB4 789 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 ZDHHC9Q9Y397 364 aa21.1■□□□□ 0.97
VCP-203ENST00000448530 CACNA1IQ9P0X4 2223 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 ZNF638Q14966 1978 aaKnown RBP21.09■□□□□ 0.97
VCP-203ENST00000448530 KLRC4O43908 158 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 PHACTR2O75167 634 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 CLSTN1O94985 981 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 SP9P0CG40 484 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 WEE1P30291 646 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 RPS9P46781 194 aaKnown RBP21.09■□□□□ 0.97
VCP-203ENST00000448530 GPR15P49685 360 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 NLRP12P59046 1061 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 TNNC1P63316 161 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 FCHO2Q0JRZ9 810 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 MAPRE1Q15691 268 aaKnown RBP21.09■□□□□ 0.97
VCP-203ENST00000448530 DDR2Q16832 855 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 KMT5BQ4FZB7 885 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 CFAP221Q4G0U5 840 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 SCN4BQ8IWT1 228 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 MRPS31Q92665 395 aaKnown RBP21.09■□□□□ 0.97
VCP-203ENST00000448530 CLDN23Q96B33 292 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 MSANTD3Q96H12 275 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 FUBP3Q96I24 572 aaKnown RBP eCLIP21.09■□□□□ 0.97
VCP-203ENST00000448530 SNX25Q9H3E2 840 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 SEMA4AQ9H3S1 761 aa21.09■□□□□ 0.97
VCP-203ENST00000448530 THG1LQ9NWX6 298 aaKnown RBP21.09■□□□□ 0.97
VCP-203ENST00000448530 PATJQ8NI35 1801 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 NCANO14594 1321 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 DENND4CQ5VZ89 1909 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 F5P12259 2224 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 MYBPHLA2RUH7 354 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 COL4A2P08572 1712 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 HMGA1P17096 107 aaKnown RBP21.08■□□□□ 0.97
VCP-203ENST00000448530 WARSP23381 471 aaKnown RBP21.08■□□□□ 0.97
VCP-203ENST00000448530 DDX6P26196 483 aaKnown RBP eCLIP21.08■□□□□ 0.97
VCP-203ENST00000448530 AVPR1AP37288 418 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 STK4Q13043 487 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 SDHAF4Q5VUM1 108 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 C1orf228Q6PIY5 440 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 CELF5Q8N6W0 485 aaKnown RBP21.08■□□□□ 0.97
VCP-203ENST00000448530 BPIFB1Q8TDL5 484 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 KBTBD7Q8WVZ9 684 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 PKMYT1Q99640 499 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 MAGEC2Q9UBF1 373 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms