RNA–Protein interactions for RNA: ENST00000448072.5

HDAC10-205, Transcript of histone deacetylase 10, human

TSL 5 BASIC

Gene HDAC10, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-205	ENST00000448072	ZNF598	Q86UK7	904 aa	Known RBP	18.22	■□□□□ 0.51
HDAC10-205	ENST00000448072	ALG3	Q92685	438 aa		18.22	■□□□□ 0.51
HDAC10-205	ENST00000448072	CD101	Q93033	1021 aa		18.22	■□□□□ 0.51
HDAC10-205	ENST00000448072	CARD9	Q9H257	536 aa		18.22	■□□□□ 0.51
HDAC10-205	ENST00000448072	ANKZF1	Q9H8Y5	726 aa		18.22	■□□□□ 0.51
HDAC10-205	ENST00000448072	RNF216	Q9NWF9	866 aa	Predicted RBP	18.22	■□□□□ 0.51
HDAC10-205	ENST00000448072	TCRBV5S1A1T	A0A578	114 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	CCDC66	A2RUB6	948 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072		C9IYK1	514 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	PGRMC1	O00264	195 aa	Known RBP	18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	SLC1A1	P43005	524 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	GRIK3	Q13003	919 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	PDCL	Q13371	301 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	DCAF12L1	Q5VU92	463 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	DCUN1D2	Q6PH85	259 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	RASGEF1C	Q8N431	466 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	C3orf20	Q8ND61	904 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.21	■□□□□ 0.51	3e-7	■■■□□ 15.5
HDAC10-205	ENST00000448072	PARD6B	Q9BYG5	372 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	RBM12	Q9NTZ6	932 aa	Known RBP	18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	TJP2	Q9UDY2	1190 aa		18.21	■□□□□ 0.51
HDAC10-205	ENST00000448072	PROSC	O94903	275 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	EOMES	O95936	686 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	WARS	P23381	471 aa	Known RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	CTNNA1	P35221	906 aa	Known RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	MARCKSL1	P49006	195 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	ATN1	P54259	1190 aa	Predicted RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	PSMC1	P62191	440 aa	Known RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	RPL7A	P62424	266 aa	Known RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	UPP1	Q16831	310 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	CRYBG2	Q8N1P7	616 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	MMGT1	Q8N4V1	131 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	MCEE	Q96PE7	176 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	LPIN3	Q9BQK8	851 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	PAAF1	Q9BRP4	392 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	FTHL17	Q9BXU8	183 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	ST7	Q9NRC1	585 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	HESX1	Q9UBX0	185 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	IP6K2	Q9UHH9	426 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	PCDHA3	Q9Y5H8	950 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	TMEM191C	A6NGB0	347 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	NBN	O60934	754 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	ERBB2	P04626	1255 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	CTNNA2	P26232	953 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	PEX5	P50542	639 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	TAP1	Q03518	808 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	ZNF211	Q13398	564 aa	Predicted RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	WSCD1	Q658N2	575 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	DSTYK	Q6XUX3	929 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	C3orf58	Q8NDZ4	430 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	LINC01599	Q8WXQ3	324 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	TNIP3	Q96KP6	325 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	SENP8	Q96LD8	212 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	RNPC3	Q96LT9	517 aa	Known RBP	18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	WDR35	Q9P2L0	1181 aa		18.2	■□□□□ 0.5
HDAC10-205	ENST00000448072	TDRD15	B5MCY1	1934 aa	Known RBP	18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	GOLGA8S	H3BPF8	625 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	PFKM	P08237	780 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	FAM163B	P0C2L3	166 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	ARHGAP17	Q68EM7	881 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	CCDC70	Q6NSX1	233 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	FBXO38	Q6PIJ6	1188 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	OSTM1	Q86WC4	334 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	IPO4	Q8TEX9	1081 aa	Known RBP	18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	DDX27	Q96GQ7	796 aa	Known RBP	18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	PITPNM1	O00562	1244 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	GABRB2	P47870	512 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	FAM189B	P81408	668 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	TUSC3	Q13454	348 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	PPP1R15B	Q5SWA1	713 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	GLB1L	Q6UWU2	654 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	TTC30A	Q86WT1	665 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	XYLT1	Q86Y38	959 aa		18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	TTC7A	Q9ULT0	858 aa	Predicted RBP	18.19	■□□□□ 0.5
HDAC10-205	ENST00000448072	B3GAT3	O94766	335 aa		18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	FGG	P02679	453 aa		18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	KRT3	P12035	628 aa		18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	CCDC130	P13994	396 aa		18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	H2AFX	P16104	143 aa	Predicted RBP	18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	RWDD2B	P57060	319 aa		18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	ZNF268	Q14587	947 aa	Predicted RBP	18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	PKDCC	Q504Y2	493 aa		18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	ARGLU1	Q9NWB6	273 aa	Predicted RBP	18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	UST	Q9Y2C2	406 aa		18.18	■□□□□ 0.5
HDAC10-205	ENST00000448072	SIGLEC16	A6NMB1	481 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	ADORA2B	P29275	332 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	GSC	P56915	257 aa	Predicted RBP	18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	GPNMB	Q14956	572 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	LONRF2	Q1L5Z9	754 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	DAB2IP	Q5VWQ8	1189 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	SLC39A5	Q6ZMH5	540 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	B3GALNT2	Q8NCR0	500 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	DBF4B	Q8NFT6	615 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	PNKP	Q96T60	521 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	AP1M1	Q9BXS5	423 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	MIS12	Q9H081	205 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	CRISPLD2	Q9H0B8	497 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	LCMT1	Q9UIC8	334 aa		18.17	■□□□□ 0.5
HDAC10-205	ENST00000448072	PIK3R2	O00459	728 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms