RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 IKBKBO14920 756 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 GJA1P17302 382 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 PSMC3P17980 439 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 ACAT1P24752 427 aaKnown RBP20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 CDC25CP30307 473 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 RPL10AP62906 217 aaKnown RBP20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 TRPC3Q13507 836 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 TAF12Q16514 161 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 SLC44A4Q53GD3 710 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 TMC2Q8TDI7 906 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 DEPDC1BQ8WUY9 529 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 MMS19Q96T76 1030 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 LPIN3Q9BQK8 851 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 DDX23Q9BUQ8 820 aaKnown RBP20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 PLA2G2FQ9BZM2 168 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 XYLT2Q9H1B5 865 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 ATXN3LQ9H3M9 355 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 ZNF334Q9HCZ1 680 aaPredicted RBP20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 GTF3C4Q9UKN8 822 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 FRMD4BQ9Y2L6 1034 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 CACNA1HO95180 2353 aa20.17■□□□□ 0.82
ATPAF2-201ENST00000444058 PI15O43692 258 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 GABRR2P28476 465 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 ENPEPQ07075 957 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 SNW1Q13573 536 aaKnown RBP20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 WDR72Q3MJ13 1102 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 ARHGAP15Q53QZ3 475 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 C4orf50Q6ZRC1 276 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 ENGASEQ8NFI3 743 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 PLEKHO2Q8TD55 490 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 CEP295NLQ96MC4 621 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 TIGD1Q96MW7 591 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 PI4K2AQ9BTU6 479 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 TRMT61BQ9BVS5 477 aaKnown RBP20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 SLITRK6Q9H5Y7 841 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 IL21Q9HBE4 155 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 PIEZO1Q92508 2521 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 WDFY4Q6ZS81 3184 aa20.16■□□□□ 0.82
ATPAF2-201ENST00000444058 MYBPHLA2RUH7 354 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 LRRIQ3A6PVS8 624 aaPredicted RBP20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 STK25O00506 426 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 PHACTR2O75167 634 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 C4BPAP04003 597 aaKnown RBP20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 CSH1P0DML2 217 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 CSH2P0DML3 217 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 HMGA1P17096 107 aaKnown RBP20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 RFX1P22670 979 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 LMO2P25791 158 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 RPL13P26373 211 aaKnown RBP20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 MAGEA11P43364 429 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 CASP4P49662 377 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 TNNC1P63316 161 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 FAM160A1Q05DH4 1040 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 MLF2Q15773 248 aaPredicted RBP20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 TDRD10Q5VZ19 366 aaKnown RBP20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 SPATA2LQ8IUW3 424 aaPredicted RBP20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 MFSD6LQ8IWD5 586 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 CCDC105Q8IYK2 499 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 IRF7Q92985 503 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 MYRFLQ96LU7 910 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 GSDMAQ96QA5 445 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 GCNAQ96QF7 691 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 SYT15Q9BQS2 421 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 MKNK1Q9BUB5 465 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 OSBPL6Q9BZF3 934 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 TASP1Q9H6P5 420 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 OBP2AQ9NY56 170 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 SIT1Q9Y3P8 196 aa20.15■□□□□ 0.82
ATPAF2-201ENST00000444058 NR2F2P24468 414 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 CYP2F1P24903 491 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 HOXD11P31277 338 aaPredicted RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 GNL1P36915 607 aaPredicted RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 MCCD1P59942 119 aaPredicted RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 MYL6P60660 151 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 BIRC3Q13489 604 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 VSTM1Q6UX27 236 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 VITQ6UXI7 678 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 ARID3BQ8IVW6 561 aaPredicted RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 ELOA2Q8IYF1 753 aaPredicted RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 GIPC2Q8TF65 315 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 TRMT2BQ96GJ1 504 aaKnown RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 NELL2Q99435 816 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 GTPBP4Q9BZE4 634 aaKnown RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 SNX25Q9H3E2 840 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 BRD9Q9H8M2 597 aa20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 HOOK1Q9UJC3 728 aaKnown RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 CIZ1Q9ULV3 898 aaPredicted RBP20.14■□□□□ 0.81
ATPAF2-201ENST00000444058 KANSL1LA0AUZ9 987 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 NOL4O94818 638 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 DDX6P26196 483 aaKnown RBP eCLIP20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 VIPR2P41587 438 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 MLLT6P55198 1093 aaPredicted RBP20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 FCHO2Q0JRZ9 810 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 NCOA4Q13772 614 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 EDRF1Q3B7T1 1238 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 ZACNQ401N2 412 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 ZCWPW2Q504Y3 356 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 COBLL1Q53SF7 1204 aa20.13■□□□□ 0.81
ATPAF2-201ENST00000444058 GPR158Q5T848 1215 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms