RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 PARD3BQ8TEW8 1205 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 SYAP1Q96A49 352 aaPredicted RBP22.55■■□□□ 1.2
CDKN3-204ENST00000442975 MRPL45Q9BRJ2 306 aaKnown RBP22.55■■□□□ 1.2
CDKN3-204ENST00000442975 PLA2G2FQ9BZM2 168 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 RMND1Q9NWS8 449 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 TRAF3IP3Q9Y228 551 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 DOCK6Q96HP0 2047 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 MYBPHLA2RUH7 354 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 AOC1P19801 751 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 WARSP23381 471 aaKnown RBP22.54■■□□□ 1.2
CDKN3-204ENST00000442975 CYP2F1P24903 491 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 LMO2P25791 158 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 VIPR2P41587 438 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 CLCN5P51795 746 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 AP3M2P53677 418 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 DLG4P78352 724 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 CYP4F8P98187 520 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 PFKPQ01813 784 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 NCOA4Q13772 614 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 ARHGAP15Q53QZ3 475 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 SCARA5Q6ZMJ2 495 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 GAREM2Q75VX8 874 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 ERCC4Q92889 916 aaPredicted RBP22.54■■□□□ 1.2
CDKN3-204ENST00000442975 MYLPFQ96A32 169 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 PKMYT1Q99640 499 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 PRRX2Q99811 253 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 ABCB6Q9NP58 842 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 CDH9Q9ULB4 789 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 MYO10Q9HD67 2058 aa22.54■■□□□ 1.2
CDKN3-204ENST00000442975 ATP2C2O75185 946 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 CDC25CP30307 473 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 PTPN5P54829 565 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 DDR2Q16832 855 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 GPR158Q5T848 1215 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 LIMS2Q7Z4I7 341 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 SCN4BQ8IWT1 228 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 ENGASEQ8NFI3 743 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 OR6B3Q8NGW1 331 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 TMEM174Q8WUU8 243 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 ELMO3Q96BJ8 720 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 GPR88Q9GZN0 384 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 XYLT2Q9H1B5 865 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 SMYD3Q9H7B4 428 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 HOOK1Q9UJC3 728 aaKnown RBP22.53■■□□□ 1.2
CDKN3-204ENST00000442975 MAGED2Q9UNF1 606 aaPredicted RBP22.53■■□□□ 1.2
CDKN3-204ENST00000442975 NOTCH4Q99466 2003 aa22.53■■□□□ 1.2
CDKN3-204ENST00000442975 PI15O43692 258 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 SMC2O95347 1197 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 ATICP31939 592 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 RPL10AP62906 217 aaKnown RBP22.52■■□□□ 1.2
CDKN3-204ENST00000442975 CYP27A1Q02318 531 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 MLF2Q15773 248 aaPredicted RBP22.52■■□□□ 1.2
CDKN3-204ENST00000442975 C4orf50Q6ZRC1 276 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 GPIHBP1Q8IV16 184 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 FAM186BQ8IYM0 893 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 SMARCE1Q969G3 411 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 BRD9Q9H8M2 597 aa22.52■■□□□ 1.2
CDKN3-204ENST00000442975 CIZ1Q9ULV3 898 aaPredicted RBP22.52■■□□□ 1.2
CDKN3-204ENST00000442975 KINO60870 393 aaKnown RBP22.51■■□□□ 1.19
CDKN3-204ENST00000442975 AKAP3O75969 853 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 STAU1O95793 577 aaKnown RBP22.51■■□□□ 1.19
CDKN3-204ENST00000442975 TRIM49P0CI25 452 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 TRIM49CP0CI26 452 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 KRT13P13646 458 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 RPL13P26373 211 aaKnown RBP22.51■■□□□ 1.19
CDKN3-204ENST00000442975 GNL1P36915 607 aaPredicted RBP22.51■■□□□ 1.19
CDKN3-204ENST00000442975 PIK3CAP42336 1068 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 CLDN10P78369 228 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 NHLH1Q02575 133 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 TCF15Q12870 199 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 MAPRE1Q15691 268 aaKnown RBP22.51■■□□□ 1.19
CDKN3-204ENST00000442975 CFAP221Q4G0U5 840 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 ZNF667Q5HYK9 610 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 MDH1BQ5I0G3 518 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 VITQ6UXI7 678 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 TMC2Q8TDI7 906 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 FUBP3Q96I24 572 aaKnown RBP eCLIP22.51■■□□□ 1.19
CDKN3-204ENST00000442975 TRMT61BQ9BVS5 477 aaKnown RBP22.51■■□□□ 1.19
CDKN3-204ENST00000442975 FOXQ1Q9C009 403 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 MMRN2Q9H8L6 949 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 IL21Q9HBE4 155 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 CRTAC1Q9NQ79 661 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 NCANO14594 1321 aa22.51■■□□□ 1.19
CDKN3-204ENST00000442975 HEPACAM2A8MVW5 462 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 GALR2O43603 387 aaPredicted RBP22.5■■□□□ 1.19
CDKN3-204ENST00000442975 TACC1O75410 805 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 VNN1O95497 513 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 C4BPAP04003 597 aaKnown RBP22.5■■□□□ 1.19
CDKN3-204ENST00000442975 GDI1P31150 447 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 RAP1GAPP47736 663 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 VAMP7P51809 220 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 NFIL3Q16649 462 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 SLC44A4Q53GD3 710 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 FAM171BQ6P995 826 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 EEF2KMTQ96G04 330 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 SHDQ96IW2 340 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 DPEP3Q9H4B8 488 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 TRPV4Q9HBA0 871 aa22.5■■□□□ 1.19
CDKN3-204ENST00000442975 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.5■■□□□ 1.199e-13■■■■■ 192.3
CDKN3-204ENST00000442975 TCHHQ07283 1943 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms