RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 TNNI1P19237 187 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 GABRR2P28476 465 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 MYL7Q01449 175 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 NFE2Q16621 373 aaPredicted RBP20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 CCDC142Q17RM4 750 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 FAM171BQ6P995 826 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 SLC9A9Q8IVB4 645 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 PJA1Q8NG27 643 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 ATOH1Q92858 354 aaPredicted RBP20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 DNASE1L2Q92874 299 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 CCDC127Q96BQ5 260 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 RSPRY1Q96DX4 576 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 FNBP1Q96RU3 617 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 GDPD2Q9HCC8 539 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 FGF19O95750 216 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 RPN1P04843 607 aaKnown RBP20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 DCNP07585 359 aaKnown RBP20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 HMGA1P17096 107 aaKnown RBP20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 PSMC3P17980 439 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 GPR15P49685 360 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 CLDN10P78369 228 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 DPYDQ12882 1025 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 VEPH1Q14D04 833 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 KRBA2Q6ZNG9 492 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 TMEM150AQ86TG1 271 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 MFSD6LQ8IWD5 586 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 FSIP1Q8NA03 581 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 GOLGA5Q8TBA6 731 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 GIPC2Q8TF65 315 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 DEPDC1BQ8WUY9 529 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 PI4K2AQ9BTU6 479 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 TRMT61BQ9BVS5 477 aaKnown RBP20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 ATXN3LQ9H3M9 355 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 ABCB6Q9NP58 842 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 TRPV5Q9NQA5 729 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 GTF3C4Q9UKN8 822 aa20.29■□□□□ 0.84
HMGB3P22-201ENST00000442010 MYBPHLA2RUH7 354 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 HEPACAM2A8MVW5 462 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 ARNTLO00327 626 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 PDXKO00764 312 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 EXOC3O60645 756 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 LRRN2O75325 713 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 RHOBTB3O94955 611 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 RFX1P22670 979 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 WARSP23381 471 aaKnown RBP20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 LMO2P25791 158 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 WEE1P30291 646 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 CFAP221Q4G0U5 840 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 ARID3BQ8IVW6 561 aaPredicted RBP20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 FAM200AQ8TCP9 573 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 E2F7Q96AV8 911 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 OSBPL6Q9BZF3 934 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 SLITRK6Q9H5Y7 841 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 HEBP1Q9NRV9 189 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 MTF2Q9Y483 593 aaPredicted RBP20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 NME7Q9Y5B8 376 aa20.28■□□□□ 0.84
HMGB3P22-201ENST00000442010 VPS13AQ96RL7 3174 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 PROB1E7EW31 1015 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 ZNF202O95125 648 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 STAU1O95793 577 aaKnown RBP20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 CYP2F1P24903 491 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 PCSK1P29120 753 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 CDC25CP30307 473 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 CASP4P49662 377 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 BECN1Q14457 450 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 ANGPT1Q15389 498 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 GPR158Q5T848 1215 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 PARD3BQ8TEW8 1205 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 IRF7Q92985 503 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 FUBP3Q96I24 572 aaKnown RBP eCLIP20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 LRRC3BQ96PB8 259 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 XYLT2Q9H1B5 865 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 TASP1Q9H6P5 420 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 BRD9Q9H8M2 597 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 LTB4R2Q9NPC1 389 aa20.27■□□□□ 0.84
HMGB3P22-201ENST00000442010 ATP2C2O75185 946 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 TACC1O75410 805 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 F11P03951 625 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 FAM163BP0C2L3 166 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 CD72P21854 359 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 GDI1P31150 447 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 NBL1P41271 181 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 CYP4F8P98187 520 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 FCHO2Q0JRZ9 810 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 SDHAF4Q5VUM1 108 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 TPRG1Q6ZUI0 275 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 ZNF687Q8N1G0 1237 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 STKLD1Q8NE28 680 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 SYT15Q9BQS2 421 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 MRPL45Q9BRJ2 306 aaKnown RBP20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 CRTAC1Q9NQ79 661 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 CDH9Q9ULB4 789 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 TRAF3IP3Q9Y228 551 aa20.26■□□□□ 0.83
HMGB3P22-201ENST00000442010 RIF1Q5UIP0 2472 aaKnown RBP20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 LRRIQ3A6PVS8 624 aaPredicted RBP20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 NOL4O94818 638 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 C4BPAP04003 597 aaKnown RBP20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 NR3C1P04150 777 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 NLRP12P59046 1061 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms