RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 PPP2R5EQ16537 467 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 DCUN1D2Q6PH85 259 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 CCDC105Q8IYK2 499 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 THOC1Q96FV9 657 aaKnown RBP14.95□□□□□ -0.02
LIMD1-202ENST00000440097 OSMRQ99650 979 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 RAB17Q9H0T7 212 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 PARVAQ9NVD7 372 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 AGAP1Q9UPQ3 857 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 ATP8A1Q9Y2Q0 1164 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 TCRBV7S2A1N4TA0A589 114 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 MYL3P08590 195 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 SMIM10L2AP0DMW4 78 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 SMIM10L2BP0DMW5 78 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 CHN1P15882 459 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 ZNF132P52740 706 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 SLC8A3P57103 927 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 SLC10A6Q3KNW5 377 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 OLFML2BQ68BL8 750 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 ZNF317Q96PQ6 595 aaPredicted RBP14.95□□□□□ -0.02
LIMD1-202ENST00000440097 SIX4Q9UIU6 781 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 SLC12A4Q9UP95 1085 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 MANSC4A6NHS7 340 aaPredicted RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 RRN3P2A6NIE6 340 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 CYP2C9P11712 490 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 HSPA6P17066 643 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 BEX3Q00994 111 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 TBC1D1Q86TI0 1168 aaPredicted RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 PHF13Q86YI8 300 aaPredicted RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 SLC13A5Q86YT5 568 aaPredicted RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 RASAL3Q86YV0 1011 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 ANKS4BQ8N8V4 417 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 TFAP2BQ92481 460 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 CENPTQ96BT3 561 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 KIF12Q96FN5 646 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 SELENOSQ9BQE4 189 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 APOL6Q9BWW8 343 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 GCOM2Q9BZD3 368 aaPredicted RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 ASB7Q9H672 318 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 SMYD3Q9H7B4 428 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 SYNCQ9H7C4 482 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 EBF2Q9HAK2 575 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 RASAL2Q9UJF2 1139 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 L3MBTL1Q9Y468 752 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 TNPO2O14787 897 aaKnown RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 PHF2O75151 1096 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 NPTXRO95502 500 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 CTNNA2P26232 953 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 SLC1A1P43005 524 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 POU5F1Q01860 360 aaKnown RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 FAM133BQ5BKY9 247 aaKnown RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 CYP4A22Q5TCH4 519 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 DNAJC24Q6P3W2 148 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 CCDC137Q6PK04 289 aaKnown RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 ZNF410Q86VK4 478 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 ERICH1Q86X53 443 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
LIMD1-202ENST00000440097 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 PRELID2Q8N945 189 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 HPDLQ96IR7 371 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 VCPIP1Q96JH7 1222 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 AP5M1Q9H0R1 490 aa14.94□□□□□ -0.02
LIMD1-202ENST00000440097 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 SHBGP04278 402 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 RPL7AP62424 266 aaKnown RBP14.93□□□□□ -0.02
LIMD1-202ENST00000440097 HTRA3P83110 453 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 MORN1Q5T089 497 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 PPP1R2P3Q6NXS1 205 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 MCEEQ96PE7 176 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 HES2Q9Y543 173 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 NRCAMQ92823 1304 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 A6NJR5 290 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 GOLGA8SH3BPF8 625 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 PROSCO94903 275 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 ANP32DO95626 131 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 ITGBL1O95965 494 aaPredicted RBP14.93□□□□□ -0.02
LIMD1-202ENST00000440097 CALB1P05937 261 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 GSTA1P08263 222 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 P4HA1P13674 534 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 MMP8P22894 467 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 CHRNA3P32297 505 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 SNX1Q13596 522 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 LRRC34Q8IZ02 419 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 UBR7Q8N806 425 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 HEMGNQ9BXL5 484 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 CDHR5Q9HBB8 845 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 RNF19AQ9NV58 838 aa14.93□□□□□ -0.02
LIMD1-202ENST00000440097 KCNJ1P48048 391 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 CCNHP51946 323 aaPredicted RBP14.92□□□□□ -0.02
LIMD1-202ENST00000440097 MFSD10Q14728 455 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 KYAT1Q16773 422 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 PIGWQ7Z7B1 504 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 JAMLQ86YT9 394 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 C1orf54Q8WWF1 131 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 DNAJB3Q8WWF6 145 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 ATXN2LQ8WWM7 1075 aaKnown RBP14.92□□□□□ -0.02
LIMD1-202ENST00000440097 FAM114A2Q9NRY5 505 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms